Gene Information

Name : spaN (SBG_2512)
Accession : YP_004731332.1
Strain : Salmonella bongori NCTC 12419
Genome accession: NC_015761
Putative virulence/resistance : Virulence
Product : surface presentation of antigens protein (associated with type III secretion and virulence)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2754845 - 2755846 bp
Length : 1002 bp
Strand : -
Note : -

DNA sequence :
ATGGGCGATGTGTCATCTGTCAGTTCATCCAGAAATTTTTTACTGCCGCAGCAGGATGAGGTCAGCGGTTTATCAGAAGC
ATTAAAGAAAGCGTTGGAAAAACATAAGACAGAATATATCGATGACAAAAAAGATCGCGAATATGGCGATACTTTCGTTA
TGCATAAGGAAACAGCATTACCCGTTTTACTGGCGGCACTGCGACAGGGCGCGCCAGCGAAATCAGAACAGCACAGTGGT
CATGCTTCGGGTCTGCAGCATAATGTGAAAGGCGATTTTCGGATTGCAGAGAAATTGTTGAAGGTCACATCTGAAAAATC
AGTCACGCTGGTATCAGACGTGAAGAAAGCAGATAAAACCGCGGCGTTATTATCGTCCAGGAATATGCAGGTAGCTGAAG
TCGGCAGTAAAAAATTATCCACTGACTTAAAAGCCGTCAGTGAATTAGCGGATAACGCCATGGGTGTCACGGACGATAAT
GTCAAGGCGATCCATGGAGATCATAAAGTTATCGCGGGCGAAGGCGTTCGTAAAGACGGAACGCCGCTGGCGGGGGATGT
CGCCTCTTCCCGTATGGCGGCAACCAATACCAGTAAGTCTGATGATAAAGATCATAAGAAGATCAAAGAGGCTTCTCAGC
TTTCCCTGCAACCCACAACGATTGCCGATCTCAGCCAATTATCCGGTGGTGATGAAAATATGCCTTTAGCGGCGCACTCA
AAACAGGCGATGACGACTTTCCCGATCACCGATGGGGTGAAGGGAGATGATAACTCGCTGACTTACCGTTTTCAGCGCTG
GGGAAATGACTACTCCGTCAATATTCAGGCGCGGCAGGCAGGGGAGTTTTCGTTAATACCGTCAAATACGCAGGTTGAGC
ATCGTTTGCATGATCAATGGCAGAACGGTAACCCTCAGCGCTGGCACCTGATGCGAGACGATCAGCAAAACCCGCAGCAG
CAACAGCACGGACAGCATTCTGGCGAGGAGGATGACGCCTGA

Protein sequence :
MGDVSSVSSSRNFLLPQQDEVSGLSEALKKALEKHKTEYIDDKKDREYGDTFVMHKETALPVLLAALRQGAPAKSEQHSG
HASGLQHNVKGDFRIAEKLLKVTSEKSVTLVSDVKKADKTAALLSSRNMQVAEVGSKKLSTDLKAVSELADNAMGVTDDN
VKAIHGDHKVIAGEGVRKDGTPLAGDVASSRMAATNTSKSDDKDHKKIKEASQLSLQPTTIADLSQLSGGDENMPLAAHS
KQAMTTFPITDGVKGDDNSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLHDQWQNGNPQRWHLMRDDQQNPQQ
QQHGQHSGEEDDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
invJ YP_217811.1 surface presentation of antigens; secretory proteins Virulence SPI-1 Protein 2e-113 79
spaN NP_457286.1 surface presentation of antigens protein (associated with type III secretion and virulence) Virulence SPI-1 Protein 2e-112 78
spaN NP_806495.1 antigen presentation protein SpaN Virulence SPI-1 Protein 2e-112 78
invJ NP_461813.1 needle length control protein Virulence SPI-1 Protein 4e-113 78

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
spaN YP_004731332.1 surface presentation of antigens protein (associated with type III secretion and virulence) VFG0553 Protein 2e-113 78