Gene Information

Name : spaQ (SBG_2509)
Accession : YP_004731329.1
Strain : Salmonella bongori NCTC 12419
Genome accession: NC_015761
Putative virulence/resistance : Virulence
Product : virulence associated secretory protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4794
EC number : -
Position : 2752984 - 2753244 bp
Length : 261 bp
Strand : -
Note : -

DNA sequence :
ATGGATGATTTAGTGTTTGCAGGTAATAAGGCGCTCTATCTTGTTCTGATCCTTTCAGGATGGCCGACGATTGTCGCAAC
GGTTATCGGCCTGCTGGTTGGATTATTCCAGACGGTAACGCAATTACAGGAACAAACGCTGCCTTTTGGTATTAAGTTAC
TTGGCGTGTGTTTATGTCTGTTCTTACTGTCTGGCTGGTATGGCGAAGTTTTACTCTCTTACGGGCGTCAGGTGATATTT
CTGGCGTTGGCGAAGGGGTAA

Protein sequence :
MDDLVFAGNKALYLVLILSGWPTIVATVIGLLVGLFQTVTQLQEQTLPFGIKLLGVCLCLFLLSGWYGEVLLSYGRQVIF
LALAKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
spaQ YP_217808.1 surface presentation of antigens; secretory proteins Virulence SPI-1 Protein 4e-27 99
spaQ NP_457283.1 secretory protein (associated with virulence) Virulence SPI-1 Protein 4e-27 99
spaQ NP_806492.1 virulence-associated secretory protein Virulence SPI-1 Protein 4e-27 99
spaQ NP_461810.1 needle complex export protein Virulence SPI-1 Protein 4e-27 99
spaQ AAS66866.1 SpaQ Not tested SSR-2 Protein 8e-20 71
ECs3724 NP_311751.1 EpaQ Not tested LIM Protein 3e-18 69
epaQ AAZ31292.1 EpaQ Virulence ETT2 Protein 3e-18 68
ysaS AAS66847.1 YsaS Not tested SSR-1 Protein 6e-11 52
hrcS AAB06006.1 HrcS Virulence Hrp PAI Protein 2e-08 48
hrcS AAT96263.1 HrcS Virulence S-PAI Protein 7e-07 48
hrcS AAT96304.1 HrcS Virulence S-PAI Protein 7e-07 48
hrcS AAT96344.1 HrcS Virulence S-PAI Protein 7e-07 48
lscS AAO18039.1 LscS Virulence TTSS locus Protein 1e-05 45
hrcS ABA47280.1 HrcS Virulence S-PAI Protein 2e-06 44
hrcS AAT96147.1 HrcS Virulence T-PAI Protein 7e-07 41
hrcS AAT96201.1 HrcS Virulence T-PAI Protein 7e-07 41
hrcS ABQ88360.1 HrcS Virulence Hrp PAI Protein 1e-04 41
hrpO AAB05076.1 HrpO Virulence Hrp PAI Protein 1e-04 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
spaQ YP_004731329.1 virulence associated secretory protein VFG0550 Protein 1e-27 99
spaQ YP_004731329.1 virulence associated secretory protein VFG1013 Protein 3e-19 71
spaQ YP_004731329.1 virulence associated secretory protein VFG2454 Protein 3e-12 56
spaQ YP_004731329.1 virulence associated secretory protein VFG1772 Protein 1e-15 54
spaQ YP_004731329.1 virulence associated secretory protein VFG0187 Protein 0.001 50
spaQ YP_004731329.1 virulence associated secretory protein VFG0395 Protein 5e-07 48
spaQ YP_004731329.1 virulence associated secretory protein VFG0043 Protein 1e-04 42
spaQ YP_004731329.1 virulence associated secretory protein VFG2132 Protein 5e-08 41