Gene Information

Name : spaR (SBG_2508)
Accession : YP_004731328.1
Strain : Salmonella bongori NCTC 12419
Genome accession: NC_015761
Putative virulence/resistance : Virulence
Product : virulence associated secretory protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4791
EC number : -
Position : 2752189 - 2752980 bp
Length : 792 bp
Strand : -
Note : -

DNA sequence :
ATGTTTTATGCGTTGTACTTTGAAATTCATAACCTGGTTGCCGCTGCGGCAATGGGATTTGCTCGTGTGGCGCCGATTTT
TTTCTTTCTGCCCTTTTTAAATAGCGGGGTATTAAGCGGCGCGCCGAGAAATGCCATTATCGTACTGGTGGCGCTGGGAG
TATGGCCGCATGAACTGAGTGAGGCGCCGCCGTTTTTATCGGTGGCGATGATCCCGTTAATTCTGCAAGAAGCTGCGGTA
GGCGTTATGCTGGGCTGCCTGCTGTCGTGGCCTTTTTGGGTGTTACATGCGTTGGGCTGTATCATCGATAACCAGAGAGG
CGCAACGCTCAGTAGCAGTATCGATCCGGCAAATGGCATTGATACCTCGGAAATGGCTAATTTCCTGAACATGTTTGCCG
CGGTCGTGTATTTACAAAATGGCGGGCTGGTTACCATGGTTGACGTCTTAAATAAAAGCTATCAGCTATGCGATCCAATG
AATGAGTGTACGCCTTCATTACCGCCTTTATTAACGTTTATTAATCAGGTGGCGCAAAATGCGTTAGTTCTGGCCAGTCC
GGTCGTATTGGTTTTGTTGCTGTCAGAGGTCTTTCTGGGATTATTGTCGCGTTTTGCTCCCCAGATGAACGCGTTTGCTA
TTTCACTGACGGTGAAAAGCGGTATCGCGGTATTAATCATGCTGTTTTATTTCTCTCCAGTACTCCCGGACAATGTGCTG
CGACTGTCTTTCCAGGCCACGGGATTAAGTAGCTGGTTCTACGAGCGGGGAGCAACGCATGTCGTCGAATAA

Protein sequence :
MFYALYFEIHNLVAAAAMGFARVAPIFFFLPFLNSGVLSGAPRNAIIVLVALGVWPHELSEAPPFLSVAMIPLILQEAAV
GVMLGCLLSWPFWVLHALGCIIDNQRGATLSSSIDPANGIDTSEMANFLNMFAAVVYLQNGGLVTMVDVLNKSYQLCDPM
NECTPSLPPLLTFINQVAQNALVLASPVVLVLLLSEVFLGLLSRFAPQMNAFAISLTVKSGIAVLIMLFYFSPVLPDNVL
RLSFQATGLSSWFYERGATHVVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
spaR NP_461809.1 needle complex export protein Virulence SPI-1 Protein 7e-98 97
spaR NP_457282.1 secretory protein (associated with virulence) Virulence SPI-1 Protein 2e-96 96
spaR NP_806491.1 virulence-associated secretory protein Virulence SPI-1 Protein 2e-96 96
spaR YP_217807.1 surface presentation of antigens; secretory proteins Virulence SPI-1 Protein 8e-96 95
spaR AAS66867.1 SpaR Not tested SSR-2 Protein 2e-30 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
spaR YP_004731328.1 virulence associated secretory protein VFG0549 Protein 3e-98 97
spaR YP_004731328.1 virulence associated secretory protein VFG1014 Protein 6e-34 52
spaR YP_004731328.1 virulence associated secretory protein VFG2453 Protein 5e-28 44
spaR YP_004731328.1 virulence associated secretory protein VFG1771 Protein 5e-22 41