Gene Information

Name : iagB (SBG_2498)
Accession : YP_004731319.1
Strain : Salmonella bongori NCTC 12419
Genome accession: NC_015761
Putative virulence/resistance : Virulence
Product : cell invasion protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0741
EC number : -
Position : 2741788 - 2742270 bp
Length : 483 bp
Strand : +
Note : -

DNA sequence :
ATGCGTTATTTTTTTGCCATCATCATCTGGTTGCTTAGTATGAGCCCGGCATGGGCCGATTGCTGGCTCCAGGCTGAAAA
AATGTTTAATATTGAGTCAGAACTGCTTTATGCTATTGCTCAGCAGGAATCGGCAATGAAACCTGGTGCCATTGGTCGCA
ACCGGGATGGCTCTACCGATATTGGCTTGATGCAAATTAATAGCTCCCATATGAAAAGGTTGAAAAAGATGGGAGTCAGT
GAAAAGCAGTTATTACAGGACCCCTGTATTTCAGTCATTGTGGGTGCATCCATTTTATCAGATATGATGAAAATTTATGG
TTATAGTTGGGAGGCCGTTGGCGCTTATAATGCCGGAACGTCGCCAAAAAGGGCGGAGATAAGAAAACGCTATGCCAAGA
AAGTTTGGGAGAATTACAAAAAATTAAAAGAGATGCCCGCAGAAGAAAAAAACAAAAAGCTTACTATTGCGTTACAAAAA
TAA

Protein sequence :
MRYFFAIIIWLLSMSPAWADCWLQAEKMFNIESELLYAIAQQESAMKPGAIGRNRDGSTDIGLMQINSSHMKRLKKMGVS
EKQLLQDPCISVIVGASILSDMMKIYGYSWEAVGAYNAGTSPKRAEIRKRYAKKVWENYKKLKEMPAEEKNKKLTIALQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iagB NP_461798.1 invasion protein precursor Virulence SPI-1 Protein 5e-65 88
iagB NP_457271.1 cell invasion protein Virulence SPI-1 Protein 1e-65 88
iagB NP_806480.1 cell invasion protein Virulence SPI-1 Protein 1e-65 88
iagB YP_217796.1 cell invasion protein Virulence SPI-1 Protein 6e-65 88
ECO111_3763 YP_003236099.1 hypothetical protein Not tested LEE Protein 8e-20 45
unnamed AAC38373.1 rOrf3 Not tested LEE Protein 5e-20 45
Z5131 NP_290279.1 hypothetical protein Not tested LEE Protein 6e-20 45
unnamed AAC31524.1 L0045 Not tested LEE Protein 4e-20 45
ECs4579 NP_312606.1 hypothetical protein Not tested LEE Protein 6e-20 45
unnamed ACU09469.1 putative lytic transglycosylase Not tested LEE Protein 4e-20 45
ECO103_3629 YP_003223486.1 hypothetical protein Not tested LEE Protein 5e-20 45
unnamed AAK26704.1 unknown Not tested LEE Protein 3e-20 45
ECO26_5260 YP_003232142.1 hypothetical protein Not tested LEE Protein 5e-20 45
unnamed AAL06358.1 unknown Not tested LEE Protein 7e-21 45
st13 CAC81851.1 ST13 protein Not tested LEE II Protein 3e-20 45
unnamed CAI43885.1 hypothetical protein Not tested LEE Protein 3e-20 45
unnamed AAL57531.1 unknown Not tested LEE Protein 3e-20 45
etgA AFO66324.1 putative lytic transglycosylase Not tested SESS LEE Protein 3e-23 42
etgA AFO66404.1 putative lytic transglycosylase Not tested SESS LEE Protein 3e-23 42
ECs3711 NP_311738.1 hypothetical protein Not tested LIM Protein 2e-17 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
iagB YP_004731319.1 cell invasion protein VFG0539 Protein 1e-65 88
iagB YP_004731319.1 cell invasion protein VFG0823 Protein 2e-20 45
iagB YP_004731319.1 cell invasion protein VFG0719 Protein 2e-20 45
iagB YP_004731319.1 cell invasion protein VFG0994 Protein 6e-25 44