|
Name : prgK (SBG_2492) Accession : YP_004731313.1 Strain : Salmonella bongori NCTC 12419 Genome accession: NC_015761 Putative virulence/resistance : Virulence Product : pathogenicity 1 island effector protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4669 EC number : - Position : 2735225 - 2735983 bp Length : 759 bp Strand : - Note : - DNA sequence : ATGATTCGTCGATATCTATATACCTTTCTGCTGGTAATGACCCTTGCCGGCTGTAAGGATAAGGATTTATTAAAAGGACT GGACCAGGAACAGGCTAATGAGGTCATTGCCGTTCTGCAAATGCATAATATAGAGGCGAATAAAATTGATAGCGGAAAAT TGGGCTATAGCATTACCGTTGCTGAGCCCGATTTTACCGCCGCGGTGTACTGGATTAAAACTTATCAGCTGCCTCCCCGG CCACGGGTAGAAATAGCGCAGATGTTCCCGGCGGATTCGCTGGTCTCATCTCCGCGAGCTGAAAAGGCCCGGTTATATTC GGCTATTGAGCAGCGACTGGAACAGTCATTACAGACGATGGAGGGCGTGCTCTCCGCCAGGGTCCATATTAGTTATGATA TTGATGCTGGTGAAAATGGACGTCCGTCAAAACCGGTTCATTTATCGGCATTAGCGGTATATGAACGAGGTTCGCCGCTG GCGCATCAGATCAGCGATATCAAGCGGTTTTTAAAGAATAGTTTTGCCGATGTGGATTATGACAACATTTCTGTGGTGTT GTCAGAACGTACGGACGCCCAGTTGCAGGCTCCCGGTACGCCAGTAAAACGTAATTCTTTTGAAACCAGCTGGATTGTAC TGATTATCTTGTTATCCGTGATGTCGGCAGGATTGGGCGTCTGGTATTACAAAAATCATTATGCCGCCAATAAGAAAGGC ATAACGACTGATGAGAAGGCGAAATCGTCGAATGAATAG Protein sequence : MIRRYLYTFLLVMTLAGCKDKDLLKGLDQEQANEVIAVLQMHNIEANKIDSGKLGYSITVAEPDFTAAVYWIKTYQLPPR PRVEIAQMFPADSLVSSPRAEKARLYSAIEQRLEQSLQTMEGVLSARVHISYDIDAGENGRPSKPVHLSALAVYERGSPL AHQISDIKRFLKNSFADVDYDNISVVLSERTDAQLQAPGTPVKRNSFETSWIVLIILLSVMSAGLGVWYYKNHYAANKKG ITTDEKAKSSNE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| prgK | NP_457265.1 | pathogenicity 1 island effector protein | Virulence | SPI-1 | Protein | 1e-113 | 98 |
| prgK | NP_806474.1 | pathogenicity island 1 effector protein | Virulence | SPI-1 | Protein | 1e-113 | 98 |
| prgK | YP_217790.1 | cell invasion protein | Virulence | SPI-1 | Protein | 7e-114 | 98 |
| prgK | NP_461792.1 | needle complex inner membrane lipoprotein | Virulence | SPI-1 | Protein | 7e-114 | 98 |
| prgK | AAS66872.1 | PrgK | Virulence | SSR-2 | Protein | 1e-56 | 55 |
| ECs3716 | NP_311743.1 | EprK | Not tested | LIM | Protein | 3e-54 | 55 |
| eprK | AAZ31284.1 | EprK | Virulence | ETT2 | Protein | 4e-53 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| prgK | YP_004731313.1 | pathogenicity 1 island effector protein | VFG0533 | Protein | 3e-114 | 98 |
| prgK | YP_004731313.1 | pathogenicity 1 island effector protein | VFG0998 | Protein | 3e-45 | 48 |
| prgK | YP_004731313.1 | pathogenicity 1 island effector protein | VFG1787 | Protein | 3e-37 | 47 |
