Gene Information

Name : hilC (SBG_2488)
Accession : YP_004731309.1
Strain : Salmonella bongori NCTC 12419
Genome accession: NC_015761
Putative virulence/resistance : Virulence
Product : AraC family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG2207
EC number : -
Position : 2732328 - 2733215 bp
Length : 888 bp
Strand : -
Note : -

DNA sequence : 
ATGGTATTGCCTTCAATTAATCAATCAGTTGAGGCTATTAGCAATAATCACCTTCAACAATCAAATAAAGTTTCATTAAT
AAATGGATTAGCTGATGTAAGAGATTATTATGTCGCAAATTGTCTGTTAATAAAACTTAATAAAGGCTGTTTGCGAATTG
AAAATGAATTTGGAGAGTTTATTGAGCAATCTGCGCCATGTTTATTTTTATTGGAAAAAGATCAAACGATAACGTTGAGC
ATGAGCGAAATTGAAGGTCATATTAATTTTTCTTCACTGGAAGTTTCCTATGATTTAATGCAAAAGTTTTACAAAGTCTT
TTACAGCACAAGAAATTATAATGAAAGAGAGTTATCGTTAAAAACCAAGCCCAGGCACTTTTTCCATGCTGAACTTTTAC
CTGGGATGAGTGACACGTTTGACTCTATTTTACATGGTGTGGAATGCCCTCGGGTTTGCAGTAATGTGAGTATTGATGAC
CATGATTATTCCTATTATTCATTGATGTATCTCATATCGGCATTTGTACGTAAACCCGGTGGATTTGATTTCCTTGAGCG
AGCAATAAAAATTACCACGAAAGAGAAAGTTTATAACGTTATTATCAGTGATATTACCCGTAAATGGTCGCAGGCTGAGG
TGGCGGGAAAACTGTTTATGAGTGTATCAAGTCTGAAGAGAAAACTGGCCGCTGAAGATGTGAGTTTTAGTAAAATATAT
TTAGATGCCCGTATGAATCAGGCAATTAAGCTTTTACGCATGGGCGCGGGAAATATTTCACAAGTTGCGACAATGTGTGG
GTATGATACGCCTTCTTATTTTATCGCTATTTTTAAGCGGCATTTTAAAATTACACCGCTTAGCTTTATGCGTACAGTAA
ATCATTAA

Protein sequence : 
MVLPSINQSVEAISNNHLQQSNKVSLINGLADVRDYYVANCLLIKLNKGCLRIENEFGEFIEQSAPCLFLLEKDQTITLS
MSEIEGHINFSSLEVSYDLMQKFYKVFYSTRNYNERELSLKTKPRHFFHAELLPGMSDTFDSILHGVECPRVCSNVSIDD
HDYSYYSLMYLISAFVRKPGGFDFLERAIKITTKEKVYNVIISDITRKWSQAEVAGKLFMSVSSLKRKLAAEDVSFSKIY
LDARMNQAIKLLRMGAGNISQVATMCGYDTPSYFIAIFKRHFKITPLSFMRTVNH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hilC NP_461788.1 invasion regulatory protein Virulence SPI-1 Protein 2e-131 94
hilC YP_217786.1 AraC family transcriptional regulator Not tested SPI-1 Protein 5e-132 94
sprA AAD37784.1 transcriptional regulator SprA Virulence SPI-1 Protein 1e-131 94
sprA NP_457261.1 possible AraC-family transcriptional regulator Virulence SPI-1 Protein 7e-131 94
sprA NP_806470.1 AraC family transcriptional regulator Virulence SPI-1 Protein 7e-131 94

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hilC YP_004731309.1 AraC family transcriptional regulator VFG0531 Protein 7e-132 94