Gene Information

Name : sitC (SBG_2484)
Accession : YP_004731305.1
Strain : Salmonella bongori NCTC 12419
Genome accession: NC_015761
Putative virulence/resistance : Virulence
Product : iron transport inner membrane protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 2728335 - 2729195 bp
Length : 861 bp
Strand : +
Note : -

DNA sequence : 
ATGAACTGGCTTGTCGAGCCGTTTGGCTATCAGTATATGCTCAACGCGATGTGGGTCTCCGCGATGGTGGGGGGACTGTG
CGCCTTTCTCTCCTGCTATTTAATGCTCAAAGGCTGGTCACTGATTGGCGATGCGTTATCCCACTCTATTGTGCCAGGGG
TTGCGGGTGCCTGGATGTTAGGGCTGCCCTTCTCACTCGGGGCGTTTCTTTCCGGCGGTCTGGCGGCAGGCAGTATGCTT
TTTCTTAACCAACGCTCGCGCCTGAAAGAAGACGCCATTATTGGGCTTATCTTCTCCTCTTTTTTTGGCGTCGGTCTTTT
TATGGTTTCGCTCAATCCGATGTCGGTGAATATCCAGACCATTATTCTCGGCAACGTACTGGCGATCGCGCCAGCGGACA
TTTTGCAACTGGCGATTATCGGCGTAGTCTCGCTGACGATTCTGCTATTCAAGTGGAAAGATCTGATGGTCGTCTTTTTC
GACGAAACCCATGCACGTTCCATCGGCCTTCATCCGGGCCGCCTGAAGCTATTGTTTTTTACCCTCTTGTCTGTCTCCAC
CGTGGCAGCCCTGCAAACCGTCGGGGCATTTCTGGTGATCTGTCTCGTCGTCACGCCGGGCGCAACGGCCTGGTTATTAA
CCGACCGTTTCCCACGCCTGCTTGCTATTGCCTTCGCCATTGGCAGCCTGACCAGTTTTTTAGGCGCCTGGCTTAGTTAC
TGGCTGGATGGTGCCACTGGTGGGATTATCGTCGTCATGCAAACGTTGCTGTTTCTCACGGCCTTTATTTTTGCCCCAAA
ACAGGGTTTGTTAGCCAACCGCCGGCGCGCCCGCCTGCATAAGGAGGCGTCATGTTCTTAA

Protein sequence : 
MNWLVEPFGYQYMLNAMWVSAMVGGLCAFLSCYLMLKGWSLIGDALSHSIVPGVAGAWMLGLPFSLGAFLSGGLAAGSML
FLNQRSRLKEDAIIGLIFSSFFGVGLFMVSLNPMSVNIQTIILGNVLAIAPADILQLAIIGVVSLTILLFKWKDLMVVFF
DETHARSIGLHPGRLKLLFFTLLSVSTVAALQTVGAFLVICLVVTPGATAWLLTDRFPRLLAIAFAIGSLTSFLGAWLSY
WLDGATGGIIVVMQTLLFLTAFIFAPKQGLLANRRRARLHKEASCS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 3e-110 96
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 3e-110 96
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-110 96
sitC NP_461784.1 permease Virulence SPI-1 Protein 4e-110 96
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 3e-110 96

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitC YP_004731305.1 iron transport inner membrane protein BAC0351 Protein 2e-110 96
sitC YP_004731305.1 iron transport inner membrane protein BAC0441 Protein 2e-74 67

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitC YP_004731305.1 iron transport inner membrane protein VFG0527 Protein 2e-110 96