Gene Information

Name : sitA (SBG_2482)
Accession : YP_004731303.1
Strain : Salmonella bongori NCTC 12419
Genome accession: NC_015761
Putative virulence/resistance : Virulence
Product : iron transport periplasmic-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 2726603 - 2727520 bp
Length : 918 bp
Strand : +
Note : -

DNA sequence : 
ATGACGAATCTGCGCCGTCTGAAAACGCTCCTGATTGCCGGTACTGTAGCGATACTTGCGCTATCGCCGGCCTATGCAAA
AGAGAAATTTAAAGTGATCACCACGTTCACTGTTATCGCCGACATGGCGAAAAACGTGGCGGGCGACGCAGCGGACGTCA
GCTCGATTACCAAGCCCGGCGCTGAAATCCATGAGTATCAGCCAACCCCTGGCGATATTAAACGGGCACAGGGAGCACAA
CTTATTCTTGCAAACGGTCTGAACCTGGAGCGGTGGTTCGCTCGCTTTTATCAGCATCTTTCCGGCGTACCGGAAGTGGT
CGTCTCTACTGGTGTTAAACCGATGGGGATTACCGAAGGTCCTTATAACGGTAAGCCGAACCCACATGCCTGGATGTCGG
CTGAAAATGCGCTGATTTATGTCGATAACATTCGCGACGCACTGGTGAAGTACGATCCGGATAATGCGGCAACCTATAAG
CAAAACGCTGAGCATTATAAAGCGCAAATTCGCCAGATGGCCGATCCATTGCGCGCTGAACTGGAAAAAATCCCTGCCGA
CCAGCGCTGGCTGGTCACCAGCGAAGGCGCTTTCTCGTATCTGGCGCGCGATAACGATATGAAAGAACTCTATCTGTGGC
CGATTAACGCCGATCAACAAGGTACGCCGAAACAAGTGCGTAAAGTGATCGATACCATTAAAAAGCACCATATCCCCGCC
ATCTTTAGCGAGAGTACGGTTTCCGATAAACCTGCCCGTCAGGTCGCGCGTGAATCCGGTGCGCATTATGGCGGTGTGCT
GTATGTCGATTCGCTGAGCGCCGCCGATGGCCCGGTGCCGACCTATCTGGATCTGCTCCGTGTCACTACTGAAACTATCG
TCAATGGCATCAACGACGGTCTGAGGAGTCAACAATGA

Protein sequence : 
MTNLRRLKTLLIAGTVAILALSPAYAKEKFKVITTFTVIADMAKNVAGDAADVSSITKPGAEIHEYQPTPGDIKRAQGAQ
LILANGLNLERWFARFYQHLSGVPEVVVSTGVKPMGITEGPYNGKPNPHAWMSAENALIYVDNIRDALVKYDPDNAATYK
QNAEHYKAQIRQMADPLRAELEKIPADQRWLVTSEGAFSYLARDNDMKELYLWPINADQQGTPKQVRKVIDTIKKHHIPA
IFSESTVSDKPARQVARESGAHYGGVLYVDSLSAADGPVPTYLDLLRVTTETIVNGINDGLRSQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 6e-139 98
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 2e-139 98
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 2e-139 98
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 2e-139 98
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 2e-139 98

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitA YP_004731303.1 iron transport periplasmic-binding protein BAC0349 Protein 1e-139 98
sitA YP_004731303.1 iron transport periplasmic-binding protein BAC0439 Protein 5e-90 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitA YP_004731303.1 iron transport periplasmic-binding protein VFG0525 Protein 1e-139 98