|
Name : gabD (SBG_2416) Accession : YP_004731242.1 Strain : Salmonella bongori NCTC 12419 Genome accession: NC_015761 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 2664258 - 2665706 bp Length : 1449 bp Strand : + Note : - DNA sequence : ATGCAACTTAATGACTCTACCCTGTTCCGCCAGCAGGCGTTTATCGACGGCAACTGGCGCGACGCACACGGCGGCGACGT CATCACCGTGAGCAACCCCGCCAACGGCAAAACGCTCGGTACGGTACCTAAAATGGGCGCGAAAGAGACCCGTGATGCCA TCGACGCCGCTAATCGCGCCCTACCCGCCTGGCGCGCACTCACCGCTAAAGAGCGAGCCACGGCTCTGCGTCGCTGGTTC AATCTGATGATGGAACATCAGGACGATCTGGCGCGTCTGATGACGTTGGAACAGGGCAAACCACTGGCGGAAGCGAAAGG CGAAATCAGCTATGCTGCCTCGTTTATTGAGTGGTTCGCCGAAGAGGGTAAGCGCATCTACGGTGACACCATTCCAGGCC ATCAGGCCGATAAGCGGCTGATTGTGATTAAACAGCCCATCGGTGTCACCGCCGCAATTACCCCGTGGAACTTCCCTTCA GCAATGATTACCCGCAAAGCCGGTCCTGCACTGGCCGCGGGTTGCACGATGGTGCTCAAACCCGCCAGCCAGACGCCGTT TTCCGCACTGGCGCTGGCGGAATTGGCCCATCGCGCTGGGATACCGGCAGGCGTCTTTAACGTTGTTACCGGTTCAGCAG GCGATGTCGGCGGCGAACTCACCAGCAACCCGCTGGTGCGTAAACTGTCGTTTACCGGCTCAACGGAAATTGGCCGTCAG TTGATGGAACAGTGCGCCAAAGACATTAAAAAAGTATCGCTGGAATTAGGCGGTAATGCGCCATTTATTGTCTTTGACGA CGCCGACCTGGACAAAGCCGTAGAGGGCGCGCTGGCCTCAAAGTTTCGTAACGCCGGACAAACCTGCGTCTGCGCCAATA GGTTGTATGTTCAGGATGGCGTTTACGAGCGTTTTGCCGACAAACTCCGCCAGGCGGTAAGCAAACTTACGGTCGGTGAC GGCCTGCAAGCCGACGTCACCATCGGACCACTGATTGATGAAAAGGCCGTAGCGAAAGTCCAGGAGCATATTGCCGACGC GCTGGAAAAAGGCGCCCGCGTCATCACAGGCGGTGATGCACACAAATCAGGCGGCAATTTCTTTCAACCGACTATTCTGG CCGACGTCCCCTCTAATGCGAAAGTTGCTAAAGAGGAGACGTTCGGTCCGCTCGCCCCCTTGTTCCGTTTTAGCGACGAG GCGGACGTCATCAGGCAGGCCAACGACACAGAATTCGGCCTGGCGGCCTATTTTTACGCACGTGATTTAAGCCGCGTTTT TCGCGTTGGCGAAGCACTGGAATACGGCATCGTGGGTATTAATACCGGCATTATCTCTAACGAAGTCGCGCCTTTCGGCG GGATCAAAGCTTCCGGTTTAGGCCGTGAAGGTTCTAAATACGGTATCGAAGATTATTTAGAAATCAAATACATGTGTATC GGCCTTTAA Protein sequence : MQLNDSTLFRQQAFIDGNWRDAHGGDVITVSNPANGKTLGTVPKMGAKETRDAIDAANRALPAWRALTAKERATALRRWF NLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPS AMITRKAGPALAAGCTMVLKPASQTPFSALALAELAHRAGIPAGVFNVVTGSAGDVGGELTSNPLVRKLSFTGSTEIGRQ LMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYERFADKLRQAVSKLTVGD GLQADVTIGPLIDEKAVAKVQEHIADALEKGARVITGGDAHKSGGNFFQPTILADVPSNAKVAKEETFGPLAPLFRFSDE ADVIRQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI GL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 4e-158 | 66 |
