Gene Information

Name : cadA (SBG_2334)
Accession : YP_004731160.1
Strain : Salmonella bongori NCTC 12419
Genome accession: NC_015761
Putative virulence/resistance : Virulence
Product : lysine decarboxylase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1982
EC number : 4.1.1.18
Position : 2555854 - 2557998 bp
Length : 2145 bp
Strand : +
Note : -

DNA sequence :
ATGAACGTTATTGCTATCATGAACCACATGGGCGTCTACTTTAAAGAAGAGCCTATTCGTGAACTGCATCGTGCACTGGA
AGGTTTAAATTTCCGTATCGTCTATCCAAACGACCGGGAAGACCTGCTGAAGCTGATTGAAAATAACTCTCGCCTTTGCG
GCGTCATTTTCGACTGGGACAAATATAACCTTGAGCTTTGCGAAGAGATTAGCAAGCTGAACGAATATATGCCGCTGTAC
GCCTTTGCCAACAGCTACTCTACTCTGGACGTCAGCCTCAACGATCTGAGAATGCAGGTTCGCTTCTTTGAATATGCTTT
AGGCGCCGCGGCTGATATCGCAGCGAAAATTCGCCAGAATACCGATGAGTATATCGACAACATTCTGCCTCCTCTGACAA
AAGCCCTGTTTAAATATGTACGTGAAGGAAAATACACCTTCTGTACGCCAGGCCACATGGGCGGGACCGCTTTCCAGAAA
AGCCCGGTCGGCAGCATCTTTTATGATTTCTTCGGCCCGAACACGATGAAATCTGATATTTCGATTTCCGTTTCCGAACT
CGGTTCGCTGCTGGACCACTCTGGCCCACATAAAGAAGCGGAAGAGTATATCGCTCGCGTCTTTAATGCCGAACGTAGCT
ATATGGTCACTAACGGCACCTCTACGGCGAACAAAATCGTTGGTATGTACTCCGCGCCGGCAGGCAGCACAGTGCTGATT
GACCGTAACTGCCATAAATCGCTGACGCATCTGATGATGATGAGCGACATTACGCCGATTTATTTCCGCCCAACCCGTAA
TGCTTACGGTATTCTTGGCGGTATTCCACAAAGCGAGTTCCAGCACGCCACTATCGCTAAACGGGTCAAAGAGACGCCAA
ACGCAACCTGGCCAGTCCATGCTGTTATTACTAACTCAACCTATGACGGTCTGTTATATAACACTGATTACATCAAGAAA
ACGCTGGATGTGAAGTCCATTCATTTTGACTCCGCCTGGGTGCCTTACACCAATTTCTCCCCTATTTATCAGGGTAAATG
CGGTATGAGCGGCGACCGTGTAGAAGGCAAAATCATTTATGAAACCCAGTCAACGCATAAACTGCTGGCGGCGTTTTCAC
AGGCATCCATGATTCATGTTAAAGGTGACATCAACGAAGAAACCTTTAACGAAGCCTACATGATGCATACCACGACCTCT
CCGCACTACGGTATTGTAGCCTCGACGGAAACCGCAGCGGCGATGATGAAAGGCAATGCCGGTAAGCGTCTGATTAATGG
TTCTATCGAACGTGCGATTAAGTTCCGTAAAGAAATTAAACGCCTGAAAAGCGAATCCGACGGCTGGTTCTTTGACGTAT
GGCAGCCGGAACATATCGATGGGGCTGAATGTTGGCCGCTGCGTTCAGACAGCGCATGGCACGGCTTCAAAAATATCGAT
AACGAACACATGTACCTCGACCCGATCAAAGTCACTATCCTGACCCCGGGGATGAAAAAAGACGGTACGATGGATGAATT
CGGTATTCCGGCAAGTCTGGTCGCCAAATACCTTGATGAACGCGGCATCATCGTAGAAAAAACCGGCCCGTACAATCTGT
TGTTCCTGTTCAGCATTGGTATCGATAAAACTAAAGCATTGAGCCTGCTGCGCGCGCTCACTGAATTTAAACGCGCCTTT
GACCTGAACCTGCGCGTCAAAAACATTCTGCCGGCACTGTACCGCGAAGCGCCTGAGTTCTATGAAAATATGCGAATCCA
GGAACTGGCGCAGAATATTCATAAACTGGTCGAACACCATAATCTGCCGGACTTAATGTACCGTGCGTTTGAAGTACTGC
CGACAATGGTGATGACGCCGTATACCGCGTTCCAGAAAGAGCTGCATGGCGAAACGGAAGAGGTTTACCTTGAAGAGATG
GTTGGACGCGTCAACGCCAACATGATCCTTCCTTACCCGCCGGGAGTACCGCTGGTGATGCCTGGTGAAATGATCACCGA
GGAAAGCCGTCCGGTACTGGAATTCCTGCAAATGCTGTGCGAAATCGGCGCTCACTATCCGGGCTTCGAAACCGATATCC
ATGGCGCTTATCGTCAGGCGAACGGACGTTACACCGTTAAGGTGCTGAAAGAAAATACGAAATAA

Protein sequence :
MNVIAIMNHMGVYFKEEPIRELHRALEGLNFRIVYPNDREDLLKLIENNSRLCGVIFDWDKYNLELCEEISKLNEYMPLY
AFANSYSTLDVSLNDLRMQVRFFEYALGAAADIAAKIRQNTDEYIDNILPPLTKALFKYVREGKYTFCTPGHMGGTAFQK
SPVGSIFYDFFGPNTMKSDISISVSELGSLLDHSGPHKEAEEYIARVFNAERSYMVTNGTSTANKIVGMYSAPAGSTVLI
DRNCHKSLTHLMMMSDITPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDYIKK
TLDVKSIHFDSAWVPYTNFSPIYQGKCGMSGDRVEGKIIYETQSTHKLLAAFSQASMIHVKGDINEETFNEAYMMHTTTS
PHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLKSESDGWFFDVWQPEHIDGAECWPLRSDSAWHGFKNID
NEHMYLDPIKVTILTPGMKKDGTMDEFGIPASLVAKYLDERGIIVEKTGPYNLLFLFSIGIDKTKALSLLRALTEFKRAF
DLNLRVKNILPALYREAPEFYENMRIQELAQNIHKLVEHHNLPDLMYRAFEVLPTMVMTPYTAFQKELHGETEEVYLEEM
VGRVNANMILPYPPGVPLVMPGEMITEESRPVLEFLQMLCEIGAHYPGFETDIHGAYRQANGRYTVKVLKENTK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadA NP_756988.1 lysine decarboxylase, inducible Not tested PAI II CFT073 Protein 0.0 93
unnamed CAD66195.1 putative cadaverin decarboxylase Virulence PAI III 536 Protein 0.0 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cadA YP_004731160.1 lysine decarboxylase VFG1670 Protein 0.0 68