Name : cadA (SBG_2334) Accession : YP_004731160.1 Strain : Salmonella bongori NCTC 12419 Genome accession: NC_015761 Putative virulence/resistance : Virulence Product : lysine decarboxylase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1982 EC number : 4.1.1.18 Position : 2555854 - 2557998 bp Length : 2145 bp Strand : + Note : - DNA sequence : ATGAACGTTATTGCTATCATGAACCACATGGGCGTCTACTTTAAAGAAGAGCCTATTCGTGAACTGCATCGTGCACTGGA AGGTTTAAATTTCCGTATCGTCTATCCAAACGACCGGGAAGACCTGCTGAAGCTGATTGAAAATAACTCTCGCCTTTGCG GCGTCATTTTCGACTGGGACAAATATAACCTTGAGCTTTGCGAAGAGATTAGCAAGCTGAACGAATATATGCCGCTGTAC GCCTTTGCCAACAGCTACTCTACTCTGGACGTCAGCCTCAACGATCTGAGAATGCAGGTTCGCTTCTTTGAATATGCTTT AGGCGCCGCGGCTGATATCGCAGCGAAAATTCGCCAGAATACCGATGAGTATATCGACAACATTCTGCCTCCTCTGACAA AAGCCCTGTTTAAATATGTACGTGAAGGAAAATACACCTTCTGTACGCCAGGCCACATGGGCGGGACCGCTTTCCAGAAA AGCCCGGTCGGCAGCATCTTTTATGATTTCTTCGGCCCGAACACGATGAAATCTGATATTTCGATTTCCGTTTCCGAACT CGGTTCGCTGCTGGACCACTCTGGCCCACATAAAGAAGCGGAAGAGTATATCGCTCGCGTCTTTAATGCCGAACGTAGCT ATATGGTCACTAACGGCACCTCTACGGCGAACAAAATCGTTGGTATGTACTCCGCGCCGGCAGGCAGCACAGTGCTGATT GACCGTAACTGCCATAAATCGCTGACGCATCTGATGATGATGAGCGACATTACGCCGATTTATTTCCGCCCAACCCGTAA TGCTTACGGTATTCTTGGCGGTATTCCACAAAGCGAGTTCCAGCACGCCACTATCGCTAAACGGGTCAAAGAGACGCCAA ACGCAACCTGGCCAGTCCATGCTGTTATTACTAACTCAACCTATGACGGTCTGTTATATAACACTGATTACATCAAGAAA ACGCTGGATGTGAAGTCCATTCATTTTGACTCCGCCTGGGTGCCTTACACCAATTTCTCCCCTATTTATCAGGGTAAATG CGGTATGAGCGGCGACCGTGTAGAAGGCAAAATCATTTATGAAACCCAGTCAACGCATAAACTGCTGGCGGCGTTTTCAC AGGCATCCATGATTCATGTTAAAGGTGACATCAACGAAGAAACCTTTAACGAAGCCTACATGATGCATACCACGACCTCT CCGCACTACGGTATTGTAGCCTCGACGGAAACCGCAGCGGCGATGATGAAAGGCAATGCCGGTAAGCGTCTGATTAATGG TTCTATCGAACGTGCGATTAAGTTCCGTAAAGAAATTAAACGCCTGAAAAGCGAATCCGACGGCTGGTTCTTTGACGTAT GGCAGCCGGAACATATCGATGGGGCTGAATGTTGGCCGCTGCGTTCAGACAGCGCATGGCACGGCTTCAAAAATATCGAT AACGAACACATGTACCTCGACCCGATCAAAGTCACTATCCTGACCCCGGGGATGAAAAAAGACGGTACGATGGATGAATT CGGTATTCCGGCAAGTCTGGTCGCCAAATACCTTGATGAACGCGGCATCATCGTAGAAAAAACCGGCCCGTACAATCTGT TGTTCCTGTTCAGCATTGGTATCGATAAAACTAAAGCATTGAGCCTGCTGCGCGCGCTCACTGAATTTAAACGCGCCTTT GACCTGAACCTGCGCGTCAAAAACATTCTGCCGGCACTGTACCGCGAAGCGCCTGAGTTCTATGAAAATATGCGAATCCA GGAACTGGCGCAGAATATTCATAAACTGGTCGAACACCATAATCTGCCGGACTTAATGTACCGTGCGTTTGAAGTACTGC CGACAATGGTGATGACGCCGTATACCGCGTTCCAGAAAGAGCTGCATGGCGAAACGGAAGAGGTTTACCTTGAAGAGATG GTTGGACGCGTCAACGCCAACATGATCCTTCCTTACCCGCCGGGAGTACCGCTGGTGATGCCTGGTGAAATGATCACCGA GGAAAGCCGTCCGGTACTGGAATTCCTGCAAATGCTGTGCGAAATCGGCGCTCACTATCCGGGCTTCGAAACCGATATCC ATGGCGCTTATCGTCAGGCGAACGGACGTTACACCGTTAAGGTGCTGAAAGAAAATACGAAATAA Protein sequence : MNVIAIMNHMGVYFKEEPIRELHRALEGLNFRIVYPNDREDLLKLIENNSRLCGVIFDWDKYNLELCEEISKLNEYMPLY AFANSYSTLDVSLNDLRMQVRFFEYALGAAADIAAKIRQNTDEYIDNILPPLTKALFKYVREGKYTFCTPGHMGGTAFQK SPVGSIFYDFFGPNTMKSDISISVSELGSLLDHSGPHKEAEEYIARVFNAERSYMVTNGTSTANKIVGMYSAPAGSTVLI DRNCHKSLTHLMMMSDITPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDYIKK TLDVKSIHFDSAWVPYTNFSPIYQGKCGMSGDRVEGKIIYETQSTHKLLAAFSQASMIHVKGDINEETFNEAYMMHTTTS PHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLKSESDGWFFDVWQPEHIDGAECWPLRSDSAWHGFKNID NEHMYLDPIKVTILTPGMKKDGTMDEFGIPASLVAKYLDERGIIVEKTGPYNLLFLFSIGIDKTKALSLLRALTEFKRAF DLNLRVKNILPALYREAPEFYENMRIQELAQNIHKLVEHHNLPDLMYRAFEVLPTMVMTPYTAFQKELHGETEEVYLEEM VGRVNANMILPYPPGVPLVMPGEMITEESRPVLEFLQMLCEIGAHYPGFETDIHGAYRQANGRYTVKVLKENTK |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 0.0 | 93 |
unnamed | CAD66195.1 | putative cadaverin decarboxylase | Virulence | PAI III 536 | Protein | 0.0 | 68 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
cadA | YP_004731160.1 | lysine decarboxylase | VFG1670 | Protein | 0.0 | 68 |