Gene Information

Name : cadB (SBG_2333)
Accession : YP_004731159.1
Strain : Salmonella bongori NCTC 12419
Genome accession: NC_015761
Putative virulence/resistance : Virulence
Product : cadaverine/lysine antiporter
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0531
EC number : -
Position : 2554440 - 2555771 bp
Length : 1332 bp
Strand : +
Note : -

DNA sequence :
ATGAGTTCTGTCAAAAAGATCGGGCTATTTGCCTGTACTGGCGTCGTTGCCGGTAATATGATGGGGAGCGGGATTGCATT
ATTACCTGCCAACCTTGCCAGTATTGGTGGCATTGCCATCTGGGGCTGGGTAATTTCTATTATTGGGGCAATGTCGCTGG
CTTATGTCTATGCGAGGCTGGCGACCAAAAACCCTCAGCAGGGTGGACCTATCGCCTATGCCGGGGAAATATCTCCGGCG
TTTGGTTTCCAGACCGGGGTGCTTTATTATCATGCAAACTGGATTGGTAATTTAGCCATCGGTATTACCGCCGTTTCTTA
TCTTTCTACATTCTTCCCGGCATTAAATAATCCAATACCGGCAGGTATTGCCTGTATTGCCATCGTGTGGCTGTTTACCT
TTATTAATATGCTGGGTGGAGCATGGGTCAGCCGCTTGACGACTATTGGTCTGTTCCTGGTTTTGATCCCGGTAGTATTG
ACCGCCGTGGCCGGCTGGCATTGGTTTGATATTGCCACCTACCACGCGAACTGGAATACCTCTACGACGACCGATTCTCA
CGCCATTGTCAAAAGTATTCTGCTCTGCCTGTGGGCGTTCGTTGGCGTTGAATCTGCTGCCGTCAGCACTGGCATGGTAA
AAAACCCGAAACGTACCGTACCGCTGGCAACCATGCTGGGTACCGCACTGGCAGGCATCATTTATATCGCCGCAACTCAG
GTTATCGCCGGGATGTTCCCTGCATCCGTTATGGCCTCTTCCGGCGCGCCGTTTGCTATCAGTACCTCCACTATTTTGGG
TAACTGGGCCGCGCCGCTGGTTTCCGCCTTTACCGCTTTCGCCTGCCTGACGTCTCTGGGCTCGTGGATGATGCTGGTAG
GCCAGGCTGGGGTTCGTGCCGCCAATGACGGTAACTTCCCGAAAATTTATGGCGAAATGGATAAAAACGGTATTCCGAAA
AAAGGTCTGCTGTTAGCTGCGGTGAAAATGACTGCGCTGATGATTCTGATCACTATCATGAACTCCAGCGGCGGTAAAGC
GTCCGACCTGTTCGGTGAACTGACCGGGATCGCCGTACTGCTTACCATGTTACCGTACTTCTACTCTTGTGTTGACCTGA
TTCGCTTCGAAGGGTTCAACATCCGTAACTCAGTAAGCCTGATCTGTTCTGTGCTGGGCTGCGCGTTTTGTTTCATCGCG
CTGATGGGAGCAAGCTCTTTCGAACTCTCCGGCACCTTTATCGTCAGTCTGATCATCCTGATGTTCTATGGCCGCAAAAT
GCACCAGCGCCAGAACAACGACAGCGAAAACAATACGGCTGAAGCGCTTTAA

Protein sequence :
MSSVKKIGLFACTGVVAGNMMGSGIALLPANLASIGGIAIWGWVISIIGAMSLAYVYARLATKNPQQGGPIAYAGEISPA
FGFQTGVLYYHANWIGNLAIGITAVSYLSTFFPALNNPIPAGIACIAIVWLFTFINMLGGAWVSRLTTIGLFLVLIPVVL
TAVAGWHWFDIATYHANWNTSTTTDSHAIVKSILLCLWAFVGVESAAVSTGMVKNPKRTVPLATMLGTALAGIIYIAATQ
VIAGMFPASVMASSGAPFAISTSTILGNWAAPLVSAFTAFACLTSLGSWMMLVGQAGVRAANDGNFPKIYGEMDKNGIPK
KGLLLAAVKMTALMILITIMNSSGGKASDLFGELTGIAVLLTMLPYFYSCVDLIRFEGFNIRNSVSLICSVLGCAFCFIA
LMGASSFELSGTFIVSLIILMFYGRKMHQRQNNDSENNTAEAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadB NP_756989.1 lysine/cadaverine antiporter Not tested PAI II CFT073 Protein 0.0 90
cadB AAL67382.1 cadaverine/lysine antiporter Not tested PAI II CFT073 Protein 0.0 90
unnamed CAD66196.1 putative lysin/cadaverin transporter Virulence PAI III 536 Protein 4e-144 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cadB YP_004731159.1 cadaverine/lysine antiporter VFG1671 Protein 2e-144 68