|
Name : SBG_2173 (SBG_2173) Accession : YP_004731002.1 Strain : Salmonella bongori NCTC 12419 Genome accession: NC_015761 Putative virulence/resistance : Unknown Product : phage integrase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0582 EC number : - Position : 2370500 - 2371672 bp Length : 1173 bp Strand : + Note : - DNA sequence : ATGGCCTTAACTAATGTTCAGATTAAAAATGCAGCTCCCGGTGAGACGGACTACACCCTTTCAGATGGTTCCGGTTTGTT CATTATCATAAAACCTCAGGGTTCCAAGCTCTGGCGCTTTCGTTACCGTCGTGAAGGTAAGTTACGCCGTCTATCTTTGG GTGCCTACCCTGAGATATCCCTCTCGCAAGCGCGTATTAAAGCCGCTGAGGCTCGCGCAAAGCTGGCGCAAGGTATCAGC CCTGTAGACGAACGCCGGGAACAGAAAGAGGCCAGTAAGGTTATCAATTCCTTTGAGGGCGTTTGCCTTGAATGGCAGGC CACGCGAAAGGCTACATGGTCGGAAAGCTATGCTGACGATACAAAACGCCTGTTTGAGCGCAACGTGTTCCCAGTGCTGG GCGCACGCCCTATCGGGGATATTCAGCCGCTGGAACTGTTAGACCTGCTGCGTAAGATAGAAGATCGCGGCGCTAATGAA CTCGCCACCAAAGTACGCCGCCGCTGTGGTGAGGTGTACGCCTACGCCATTGTGACCGGGAGAGCCAAGTATAATCCGGC ACGCGACTTAGCCACCGCTATGCAACGCTTTCAGCGCGGGCATTATGCTTCTCTCGATACCGCCGATCTTCCTGCATTCC TCACAGCACTGGAGGCAACCACCGGGAACATTATGGTTAACCTTGCCGTTCGCCTGCTGATGCTTACCGGCTTACGCCCC GGCGAACTACGCAAAGGGGAATGGAAAGAGATTGATATAGATAACGCCCTGTGGGAGATCCCTGCCGAACGTATGAAGGC TCGCCGCCCTCACCTCGTGCCGCTGTCTAAACAGGCTATAGAACTGCTTCGCTCCGTTAAAGCCATCAGTGGTAATTACA GCCTGATGTTCCCCGGTAGAAATGACGTTACCCGCCCCATGTCTGATATGGCTATGAACCAGCTTATTAAGCGATGCGGT TACGGAGAAAAGCTCACCGGGCATGGATTCCGTCACATGATGAGCACCATTCTGCATGAGAAAGGCTTTAACAGCGCGTG GATAGAGCTACAGCTCGCTCACGTCGATAAAAATACCATTCGCGGCACGTACAACCGGGCGCAGTATCTGGAAGGCCGTA GAGAGATGATGCAGTGGTATGCAGATCACTTACAAAGCCTCAAAACCCAATAA Protein sequence : MALTNVQIKNAAPGETDYTLSDGSGLFIIIKPQGSKLWRFRYRREGKLRRLSLGAYPEISLSQARIKAAEARAKLAQGIS PVDERREQKEASKVINSFEGVCLEWQATRKATWSESYADDTKRLFERNVFPVLGARPIGDIQPLELLDLLRKIEDRGANE LATKVRRRCGEVYAYAIVTGRAKYNPARDLATAMQRFQRGHYASLDTADLPAFLTALEATTGNIMVNLAVRLLMLTGLRP GELRKGEWKEIDIDNALWEIPAERMKARRPHLVPLSKQAIELLRSVKAISGNYSLMFPGRNDVTRPMSDMAMNQLIKRCG YGEKLTGHGFRHMMSTILHEKGFNSAWIELQLAHVDKNTIRGTYNRAQYLEGRREMMQWYADHLQSLKTQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ESA_03025 | YP_001439090.1 | hypothetical protein | Not tested | Not named | Protein | 1e-113 | 57 |
| intL | NP_290239.1 | integrase for prophage 933L and the LEE pathogenicity island | Not tested | LEE | Protein | 1e-105 | 54 |
| int | AAC31482.1 | CP4-like integrase | Not tested | LEE | Protein | 1e-105 | 54 |
| ECs4534 | NP_312561.1 | integrase | Not tested | LEE | Protein | 1e-105 | 54 |
| int | ACU09430.1 | integrase | Not tested | LEE | Protein | 1e-105 | 54 |
| aec33 | AAW51716.1 | Int | Not tested | AGI-3 | Protein | 4e-105 | 53 |
| int | CAC39282.1 | integrase | Not tested | LPA | Protein | 3e-105 | 53 |
| int | AAD44730.1 | Int | Not tested | SHI-2 | Protein | 2e-103 | 52 |
| unnamed | AFX83955.1 | integrase | Not tested | SE-PAI | Protein | 2e-105 | 51 |
| int | AAD54663.1 | Sai integrase | Not tested | SHI-2 | Protein | 8e-103 | 51 |
| S4835 | NP_839238.1 | integrase | Not tested | SHI-2 | Protein | 1e-102 | 51 |
| SF3698 | NP_709437.1 | integrase | Not tested | SHI-2 | Protein | 1e-102 | 51 |
| intA | AAB00935.1 | integrase A | Not tested | vap locus | Protein | 2e-54 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SBG_2173 | YP_004731002.1 | phage integrase | VFG0783 | Protein | 6e-106 | 54 |
| SBG_2173 | YP_004731002.1 | phage integrase | VFG0598 | Protein | 5e-103 | 51 |
