Gene Information

Name : SBG_1853 (SBG_1853)
Accession : YP_004730696.1
Strain : Salmonella bongori NCTC 12419
Genome accession: NC_015761
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 2018621 - 2019493 bp
Length : 873 bp
Strand : +
Note : -

DNA sequence :
ATGGGCAGGTTAGGCGGTGAAATGAAGGTGCTGGCAAAGCATTGCGGTGGTAGCCATAAAACGGTGAACGATCGCATTCA
TATCGTACAGCGGTTCGACCTCCATTTACGGACGCTGAACGTTCAGATCCAGCGTGTGGCGCAGATCAAAGTTCGCCACA
TTGAAAACTACATTCATGAAAGACTGGCGCAGGGGATCAGCAAACGCACGCTACAGAATGAAATGGCCTCACTACGTGTT
GTACTGCAACAGGCCGGGCGTAAACAGATTGCAGAACACGAGCGACTGACAAATAAATCCCTGGGGCTTTCTGGTGCATC
GCGCAATGGTACGCGACAGGCCATCACACAGGATCATTACCGCTATGTGCTGGAAACGGCCCGCGCGAAAGATCCGGGGC
TGGCGGCAGCACTGGAGCTGGCGCGGCTGATGGGTTTACGCTCACAGGAGGCAGTGCAAAGTACGCAGTCACTGAAAACG
TGGAAACAGGCTGTTGAACGGGACGATACTCGTTTAACCATAGTTTTCGGCACCAAAGGCGGACGGCCCCGCGAAACAGT
GATTCTCGATGCTGGCGCAGTTAAAAAAGCACTGGATAATGCGTTAGCTGTCGCAGAAAGCCGTAATAACCGGCTGATCG
ATAAGCCCGATCTGAAAAGTGCAATGGACTACTGGCACAACCAGGCAACACGCGTTGGCCTCACTGGCGCATATTCTCCG
CATTCGCTGCGTTATGCGTGGGCGCAGGATGCCATTCGTCACTATCTGGCGCAGGGGTTCAGCAGGAAAGAGGCGCTGGC
AATGGTAGCGATGGACCTGGGGCATGGTGACGGGCGTGGGCGGTATGTAGCGCAGGTGTATGGGCAAATTTGA

Protein sequence :
MGRLGGEMKVLAKHCGGSHKTVNDRIHIVQRFDLHLRTLNVQIQRVAQIKVRHIENYIHERLAQGISKRTLQNEMASLRV
VLQQAGRKQIAEHERLTNKSLGLSGASRNGTRQAITQDHYRYVLETARAKDPGLAAALELARLMGLRSQEAVQSTQSLKT
WKQAVERDDTRLTIVFGTKGGRPRETVILDAGAVKKALDNALAVAESRNNRLIDKPDLKSAMDYWHNQATRVGLTGAYSP
HSLRYAWAQDAIRHYLAQGFSRKEALAMVAMDLGHGDGRGRYVAQVYGQI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4676 NP_458755.1 hypothetical protein Not tested SPI-7 Protein 2e-90 71
t4367 NP_807960.1 hypothetical protein Not tested SPI-7 Protein 2e-90 71
SESS1296_03610 AFO66305.1 putative DNA binding protein Not tested SESS LEE Protein 1e-95 70
SESS1635_03828 AFO66378.1 putative DNA binding protein Not tested SESS LEE Protein 1e-95 70
YE3461 YP_001007623.1 putative phage integrase Not tested YAPI Protein 4e-69 50
PMI2564 YP_002152283.1 hypothetical protein Not tested Not named Protein 1e-60 49
api85 CAF28559.1 putative integrase Not tested YAPI Protein 4e-45 48
YpsIP31758_3697 YP_001402651.1 hypothetical protein Not tested YAPI Protein 6e-65 47
STY4586 NP_458670.1 hypothetical protein Not tested SPI-7 Protein 2e-50 42
t4280 NP_807878.1 hypothetical protein Not tested SPI-7 Protein 2e-50 42