Gene Information

Name : tpx (SBG_1532)
Accession : YP_004730390.1
Strain : Salmonella bongori NCTC 12419
Genome accession: NC_015761
Putative virulence/resistance : Virulence
Product : thiol peroxidase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : -
Position : 1677086 - 1677592 bp
Length : 507 bp
Strand : +
Note : -

DNA sequence : 
ATGTCACAAATTGTCTATTTCCAGGGTAATCCAGTAACAGTTGCCAACGTTATTCCTCAGACTGGTAACAAAGCCCAGGC
TTTTACTCTTGTTGCAAAAGATCTTTCTGACGTTGCACTCAGCCAGTATGCAGGCAAACGCAAAGTGCTGAATATTTTCC
CAAGCATTGATACTGGCGTATGCGCAGCATCAGTTCGTAAGTTTAACCAACTGGCCACAGAAGTGGAGAACACGGTTGTG
TTGTGCGTTTCTGCTGACCTGCCCTTTGCGCAGTCGCGTTTTTGCGGCGCGGAAGGCCTGAGCAACGTTGTTACGCTTTC
CACTCTGCGTAATGCCGATTTTCTGAAAAACTACGGCGTCGAAATTACTGATGGCCCGCTGAAAGGCCTGGCGGCGCGCG
CAGTCATCGTGCTTGACGAAAACGACAACGTTATTTTTAGCCAACTGGTAGATGAAATTACTCATGAGCCAGACTACGAC
GCCGCGCTTAATGTCCTGAAGGCCTAA

Protein sequence : 
MSQIVYFQGNPVTVANVIPQTGNKAQAFTLVAKDLSDVALSQYAGKRKVLNIFPSIDTGVCAASVRKFNQLATEVENTVV
LCVSADLPFAQSRFCGAEGLSNVVTLSTLRNADFLKNYGVEITDGPLKGLAARAVIVLDENDNVIFSQLVDEITHEPDYD
AALNVLKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 1e-34 48
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 2e-34 48
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 9e-35 48
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 2e-34 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tpx YP_004730390.1 thiol peroxidase VFG0087 Protein 4e-35 48