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Name : umuC (SBG_1462) Accession : YP_004730327.1 Strain : Salmonella bongori NCTC 12419 Genome accession: NC_015761 Putative virulence/resistance : Unknown Product : DNA repair protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0389 EC number : - Position : 1604619 - 1605884 bp Length : 1266 bp Strand : - Note : - DNA sequence : ATGTTTGCACTGGTTGATGTGAACGCGTTTTATGCCAGTTGTGAACAGGCCTTTCGGCCTGACCTGAAAGGGAGACCGGT TGTCGTTTTGTCAAATAATGATGGCTGCGTCATTTCACGATCGGCAGAAGCAAAGCCGTGGGCAGCAATGGGCGCTCCCT ATTTTAAACAGAAAGCGATATTCAGCCGACATGGCGTGGTTTGTTTCAGTAGTAACTATGAGCTTTATGCCGATATGAGC CACCGGGTGATGTCCATTCTGGAAGCCCTCTCACCCCAGGTGGAGCATTACAGTATTGATGAGGCATTCTGCGATCTGAC AGGGGTAAGAAACTGCCGTGATCTGACCGATTTTGGCAGGGAAATTCGCGCCACGATACAACAACGTACCCGCCTGACGG TGGGGGTAGGTATTGCGCAGACCAAAACCCTGGCAAAGCTGGCTAATTATGCAGCAAAACGGTGGCATCAATCGACGGGT GGCGTAGTTGACTTATCGAATGTTGAGCGTCAGCGTAAACTGATGGCGGTACTGTCGGTGGGGGAGGTGTGGGGAGTGGG GCACCGTATCTGCAAGAAGCTTGAAGCCATGGGGATCAGAACGGTGCTGGATCTGGCTGACAGCGATATTCACTTTATCC GGAAACACTTCAATGTCGTACTCGAAAGAACAGTGCGGGAGTTACGTGGCGAACCTTGTCTGGATCTGAAGGAATTTGTT CCCGTAAGGCAGGAAATCATCTGCTCTCGATCATTTGGCGAACGTATTACTGATTATAATTCTCTGCGCCAGGCTATCTG CTGTTATGCTTCGCGAGCGGCGGAAAAACTACGCAGCGAACACCAATATTGCCGCTTTATATCGACCTTTGTCAAAACGT CTCCGTTTGCGCTTAACGAACCGTATTACAGTAACCATGCATCGGTAAAGCTGCTTACGCCAACCCAGGATAGCAGAGAT ATTATTAGCGCTGCGACACACTGTCTGGATGCAATCTGGCAGGATGGGCACTGGTATCAGAAAGCGGGGGTACTGTTGGG TGACTTTTTCAGCCAGGGATTAGCCCAGCTTAATTTATTTGATGACAATGCGCCTCGTCCCGGCAGCGAGAAGTTGATGC AAGCGCTCGATGCGCTTAATGCAAAGGAAGGAAAAGGCACTCTGTATTTCGCCGGGCAAGGGATACAGCAGCAGTGGCAA ATGAAACGTGAAATGCTGTCACCGCGGTACACGACAAGGTTTTCCGATCTGCTACATGTTAAGTAA Protein sequence : MFALVDVNAFYASCEQAFRPDLKGRPVVVLSNNDGCVISRSAEAKPWAAMGAPYFKQKAIFSRHGVVCFSSNYELYADMS HRVMSILEALSPQVEHYSIDEAFCDLTGVRNCRDLTDFGREIRATIQQRTRLTVGVGIAQTKTLAKLANYAAKRWHQSTG GVVDLSNVERQRKLMAVLSVGEVWGVGHRICKKLEAMGIRTVLDLADSDIHFIRKHFNVVLERTVRELRGEPCLDLKEFV PVRQEIICSRSFGERITDYNSLRQAICCYASRAAEKLRSEHQYCRFISTFVKTSPFALNEPYYSNHASVKLLTPTQDSRD IISAATHCLDAIWQDGHWYQKAGVLLGDFFSQGLAQLNLFDDNAPRPGSEKLMQALDALNAKEGKGTLYFAGQGIQQQWQ MKREMLSPRYTTRFSDLLHVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| samB | NP_458681.1 | UV protection protein | Not tested | SPI-7 | Protein | 7e-118 | 59 |
| umuC | NP_807889.1 | DNA polymerase V subunit UmuC | Not tested | SPI-7 | Protein | 7e-118 | 59 |
| rulB | CAI36137.1 | nucleotidyltransferase/DNA polymerase | Not tested | PPHGI-1 | Protein | 9e-90 | 51 |
| unnamed | ABR13403.1 | DNA-directed DNA polymerase | Not tested | PAGI-5 | Protein | 2e-70 | 46 |
