Gene Information

Name : SBG_1230 (SBG_1230)
Accession : YP_004730100.1
Strain : Salmonella bongori NCTC 12419
Genome accession: NC_015761
Putative virulence/resistance : Virulence
Product : pathogenicity island protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3272
EC number : -
Position : 1347967 - 1348926 bp
Length : 960 bp
Strand : -
Note : -

DNA sequence :
ATGAAAAATAAACCGGTGGTCGGCATTAGCGCATGTCTGACAGGTGCCGCAGTACGCTTTGATGGCGGACACAAACGTAT
GGATTTCGTCATGAATTCTCTGGCGCCGTGGGTGACCTACAAACCGATCTGTCCGGAGGTCGCCATCGGCCTGCCTGTTC
CTCGCCCTGCGCTGCGTCTTATCCAGACCACCCGCGGCGACATCCGGATGCGCTATAGTCATGCCCCGCACGATGATGTT
ACTGAACAGATGAACGCCTTTGCCGATCGGTTTCTACCTACGGCAGGTGAACTGGCAGGGTTTATCGTATGCGCAAAATC
CCCCAGTTGCGGAATGGAGCGTGTTCGACTGTATGATGAAAAGGGTAATCGCGGCCATAAAGCCGGCACCGGGCTATTTA
CCGCCGCGATGATGAATAAATATCCCTGGCTACCGGTGGAGGAAGATGGCCGCCTGCACGATCCGGTACTGCGCGAGAAT
TTTGTCGAACGCGTCTTCGCGCTAAATGAATTAAATGCGCTACGTGCGCAGGGATTGAGTCGTCACAGTTTGCTCGCGTT
TCATAGCCGATACAAACTTCAGCTTCTCGCCCACCACCAGGGCGGTTACCGAGAGATTGGCCCTTTCGTCGCGCGTTTGC
ACGAGTGGGACGATTTGGAGGCCTTCTTTATCCGCTACCGGGAGAAACTGATGACGATCCTGAGCCACCCCGCTTCCCGT
AAAAATCACACCAATGTGCTGATGCATATTCAGGGTTATTTTCACCGCACCCTGAATAGCAGGCAGCGCGCGGAATTACG
CGAGGTCATTCTCCGCTACCGGGCCGGCCAATTGCCGATCCTGGCACCGTTAACGCTACTAAAACACTACCTGGCGGAGC
ATCCGGATGCCTATCTGCGTACACAGAATTATTTTGAGCCGTACCCCGATACGTTAGGGCTGCGGATAGCCATTGCCTGA

Protein sequence :
MKNKPVVGISACLTGAAVRFDGGHKRMDFVMNSLAPWVTYKPICPEVAIGLPVPRPALRLIQTTRGDIRMRYSHAPHDDV
TEQMNAFADRFLPTAGELAGFIVCAKSPSCGMERVRLYDEKGNRGHKAGTGLFTAAMMNKYPWLPVEEDGRLHDPVLREN
FVERVFALNELNALRAQGLSRHSLLAFHSRYKLQLLAHHQGGYREIGPFVARLHEWDDLEAFFIRYREKLMTILSHPASR
KNHTNVLMHIQGYFHRTLNSRQRAELREVILRYRAGQLPILAPLTLLKHYLAEHPDAYLRTQNYFEPYPDTLGLRIAIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 5e-146 93
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 5e-146 93
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 1e-145 92
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 6e-146 92
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 4e-146 92

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SBG_1230 YP_004730100.1 pathogenicity island protein VFG0490 Protein 2e-146 92