Gene Information

Name : ttrC (SBG_1223)
Accession : YP_004730093.1
Strain : Salmonella bongori NCTC 12419
Genome accession: NC_015761
Putative virulence/resistance : Virulence
Product : tetrathionate reductase subunit C (membrane protein)
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG3301
EC number : -
Position : 1340150 - 1341172 bp
Length : 1023 bp
Strand : -
Note : -

DNA sequence :
ATGACGCGTTTACTCATTATTGAAGAAGTGCTGACTCACCCGCAGGAAATAAGCTGGCTACCGTGGGCGGTACAATATTT
CTTTTTCATTGGCATCGCCGCCTGCGCCGCACTATTCGCCTGCTCTCTTCACTGGCGGAAAAAAGACGCCGCGCCAGAAG
AAAATCGGGCCTTACTGATTGCCATTACCTGTGCGATTACCGCCCCGCTGGCGCTGACAGCGGATCTCCACCAGACCGCG
CGCGTCTGGCATTTCTATGCCTGGCCAACCCCCTGGTCGTGGATGCCCTGGGGAGCCTTATTCCTGCCGCTGTTTACCGG
GTTTCTCGCCCTGTGGTTCCTTGCGCAGCACATGAAACGGTTACTGCACAAAAGTTACAACGTCACTAAGTGGTTAGCTT
TAGCCAGCGCGTTTTGCGCGGTGGGTTTGCTGATTTATACCGGTCGAGAAGTCTCTGTTGTAATGGCGCGCCCAATCTGG
TTTAGCTACGCCTTTCCTGTGGTGATGTTTCTTAGCGCTTTACAGGCCTTCTTCGCACTGATGATTGCCGCCGCCCGACG
CGACTCTGTAAGGCTGCCAAAAATACTGTGGGGACAAATATGGGCGCTGGCGGCGCTGGGTCTGGTCGTTGCCATGTGGG
TCAGCGGTGACACCCTTTCCGGTACGGCAATCCGTCAGTGGATGACTGTCGCCCTGTCAGCCAAATATTACGCGGTCGGC
TGGCTGGTACTGTGGGTATTAACACTGATGTTCTGTAGCCTGACGCTACACCATCCCTTATCACAACCAAGCCGCATCCT
GCTGGTTCTGAGCGCGCTGGCGCTATGCTGGCTGATGCGCTGGACCTTACTGATCCAGGTACAAACCGTACCGAAATTCA
ATGCGCAATTTAACCCATACTCATTGCCAGGCGGAACGGATGGCTGGCTTGCGATTATCGGCACCTTCGGCCTGTGGGTA
GCGCTGCTGATTATTATTCGTGAAACGCTGAATGGGCTCACCAGGAGATTACAACATGGCTAA

Protein sequence :
MTRLLIIEEVLTHPQEISWLPWAVQYFFFIGIAACAALFACSLHWRKKDAAPEENRALLIAITCAITAPLALTADLHQTA
RVWHFYAWPTPWSWMPWGALFLPLFTGFLALWFLAQHMKRLLHKSYNVTKWLALASAFCAVGLLIYTGREVSVVMARPIW
FSYAFPVVMFLSALQAFFALMIAAARRDSVRLPKILWGQIWALAALGLVVAMWVSGDTLSGTAIRQWMTVALSAKYYAVG
WLVLWVLTLMFCSLTLHHPLSQPSRILLVLSALALCWLMRWTLLIQVQTVPKFNAQFNPYSLPGGTDGWLAIIGTFGLWV
ALLIIIRETLNGLTRRLQHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrC NP_460349.1 tetrathionate reductase complex subunit C Virulence SPI-2 Protein 3e-126 93
ttrC YP_216392.1 tetrathionate reductase complex subunit C Virulence SPI-2 Protein 8e-127 93
ttrC CAB37415.1 tetrathionate reductase subunit C (TtrC) Virulence SPI-2 Protein 3e-126 93
ttrC NP_456143.1 tetrathionate reductase subunit C (membrane protein) Virulence SPI-2 Protein 4e-126 92
ttrC NP_805055.1 tetrathionate reductase subunit C Virulence SPI-2 Protein 4e-126 92

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ttrC YP_004730093.1 tetrathionate reductase subunit C (membrane protein) VFG0485 Protein 1e-126 93