Gene Information

Name : SBG_1220 (SBG_1220)
Accession : YP_004730090.1
Strain : Salmonella bongori NCTC 12419
Genome accession: NC_015761
Putative virulence/resistance : Virulence
Product : pathogenicity island protein
Function : -
COG functional category : S : Function unknown
COG ID : COG5426
EC number : -
Position : 1334676 - 1335413 bp
Length : 738 bp
Strand : -
Note : -

DNA sequence : 
ATGAGAACTTTATTTATTGGTGAGTCATGGCACATTCATATGATTCATTCCAAAGGTTTTGATAGTTTTACATCGAGCAA
ATATGAAGAAGGTGCTGATTATTTACTGTCCTGCTTACGTCATGCCAATATAGATGTAGACTATATGCCAGCGCATATTG
TTCAGACCCAATTTCCACAAACTGTCGAGGCGTTAGCCTGCTATGACGCGATTGTTATTAGTGATATTGGAAGCAATACC
TTTCTGTTACAGAACAGGACGTTTTATAATAGAGATATTATTCCTGACGCATTAAGTCTGATCACGGATTATGTCGCCAA
TGGCGGTGGTCTGTTGATGATCGGCGGATATTTATCTTTTACAGGAATAGAGGCGAAAGCCAATTACAAAAATACTATTC
TGGCGGAGGTATTACCGGTCGACATGCTGGACGTAGATGACCGCGTAGAATTACCGCAGGGATGTCAGGCGGTAAATACA
ACAGTAGATCATTTTATTACCCAACCATTTAGTGAATGGCCACCGCTATTGGGCTATAACAAGTTTATCGCCAAAGAACA
TAGTCATACTCTTGCTGAAATCAATGGCGATCCACTGTTGGTTATGGGCCACTATAAGCAAGGAAAAGTATGCTGCTTTG
CCAGTGATTGTTCGCCACATTGGGGAAGTCCACAGTTTTTGCAATGGGAACATTACGCCACATTCTGGTGTAATGTACTG
CATTCTATAAAAAAATAA

Protein sequence : 
MRTLFIGESWHIHMIHSKGFDSFTSSKYEEGADYLLSCLRHANIDVDYMPAHIVQTQFPQTVEALACYDAIVISDIGSNT
FLLQNRTFYNRDIIPDALSLITDYVANGGGLLMIGGYLSFTGIEAKANYKNTILAEVLPVDMLDVDDRVELPQGCQAVNT
TVDHFITQPFSEWPPLLGYNKFIAKEHSHTLAEINGDPLLVMGHYKQGKVCCFASDCSPHWGSPQFLQWEHYATFWCNVL
HSIKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SC1402 YP_216389.1 hypothetical protein Not tested SPI-2 Protein 9e-107 91
orf245 NP_460346.1 hypothetical protein Not tested SPI-2 Protein 9e-107 91
ORF 245 CAB37418.1 - Not tested SPI-2 Protein 7e-107 91
STY1741 NP_456145.1 Orf 245 protein Not tested SPI-2 Protein 2e-106 91
t1249 NP_805053.1 hypothetical protein Not tested SPI-2 Protein 2e-106 91
APECO1_1077 YP_853097.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 1e-76 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SBG_1220 YP_004730090.1 pathogenicity island protein VFG0482 Protein 4e-107 91