Gene Information

Name : SBG_1218 (SBG_1218)
Accession : YP_004730088.1
Strain : Salmonella bongori NCTC 12419
Genome accession: NC_015761
Putative virulence/resistance : Virulence
Product : amino acid permease
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0531
EC number : -
Position : 1332359 - 1333702 bp
Length : 1344 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAAAAGTCAAAAAACTGTCCCTCACCGATTTAGTGCTTTATGGCCTGGTGTTTATGGTGCCTATCGCGCCTGTTTC
TCTCTATGGCGTCGTTTATAATCTTTCACACGGTATGGTTGCGCTGGTTTATATTATTGGCGCTATCGCGATGTTTTTTA
CTGCATACAGCTACTCGACATTATCGCAGCATATTTCATCGTCGGGCTCGGCTTATGCATATGCCGGGGTATGCATTAAT
CCTGCCATAGGTTTTCTTACCGGATGGATATTGTTGCTGGATTATCTTTTATTTCCTACGCTGGTTGCAGTGCTGGGCGG
TGTTGCGGTCCACGCTATTTTACCGCAGATCCCGGTCTGGGTCTGGCCGCTGATTTACGTAGCTATCGGCACCGGAATAA
ACTATCTCGGAATACAGCAAACGGCGAAATTTGATAAGTTGCTGGTTTTTATTCAACTCGGTGTCCTGGCAATCTTTGTT
CTGCTTATTGTACGCCTGATAATGACGGACAGTAGTCAGATAACCCTTTCCTTCCGACCTTTCTTCGATTCACAATGGTT
CACGCCAGGGCTCATCGCGACGGCGATTTCTGTGGCTGCGCTGAATTTTCTCGGCTTTGACGCTATCAGTACATTAAGTG
AAGAAAGCGAAGGCGGCGGCCACGCTGTCAGTAAAGCGACGCTTCTGGCATTAATCCTGGCGACGGTGCTGTTTATTATC
GTTGTGGCGTTTGCGGCATTCGCCACCGGCAACGTCGAGCGCTTCGCGGAAGGTAATGCAACGAATGAAGCCTTTTTCAC
TATAGCCGGTAACATTGGCGGCATGTGGCTCAAAGTCGCATTCTCTATCATTGTGGCGTTTGTCTGCGCCGTCGGCAACA
TAATTACTGCGCAAACGGCGGTATCCAGAGTGCTATTTTCCATGGGACGCGACCGCATGTTGCCCGCCTTCCTCGCGCAC
GTCCATACCACGCGTAAAACGCCGGATTACGCCATTTTGTTCACCGGCGGCGTCACCCTGCTGCTCAGCTACCTTTTTTC
CGGCAAGATCGAATCCATTTCTACCCTTGTGAACTTTGGCGCGCTCTTCGCTTTTTTTGTGGTGAACCTGTGTGTGTTTA
TCCTGTTTAATTTTCGGCTGAAAGCCCAGCGACGTATTTTTGCCCATATCATATCGCCAGTCATGGGTATGATAGTGATA
GGCTACGTCTGTTTAAACATGAATATTCATGCGCTGATTCTCGGGATTAGTTGGTCGGCAATCGGAATAGCGATTCTTTG
CTATCGAAAAGCACACAACCAAAACATCGCCATCGACCTGGAAGGGAAAAAGCTACTCGACTGA

Protein sequence : 
MKKVKKLSLTDLVLYGLVFMVPIAPVSLYGVVYNLSHGMVALVYIIGAIAMFFTAYSYSTLSQHISSSGSAYAYAGVCIN
PAIGFLTGWILLLDYLLFPTLVAVLGGVAVHAILPQIPVWVWPLIYVAIGTGINYLGIQQTAKFDKLLVFIQLGVLAIFV
LLIVRLIMTDSSQITLSFRPFFDSQWFTPGLIATAISVAALNFLGFDAISTLSEESEGGGHAVSKATLLALILATVLFII
VVAFAAFATGNVERFAEGNATNEAFFTIAGNIGGMWLKVAFSIIVAFVCAVGNIITAQTAVSRVLFSMGRDRMLPAFLAH
VHTTRKTPDYAILFTGGVTLLLSYLFSGKIESISTLVNFGALFAFFVVNLCVFILFNFRLKAQRRIFAHIISPVMGMIVI
GYVCLNMNIHALILGISWSAIGIAILCYRKAHNQNIAIDLEGKKLLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1743 NP_456146.1 putative amino acid permease Not tested SPI-2 Protein 2e-177 97
t1247 NP_805052.1 amino acid permease Not tested SPI-2 Protein 2e-177 97
ycjj YP_216387.1 amino acid permease Not tested SPI-2 Protein 1e-177 97
orf48 NP_460344.1 amino acid permease Not tested SPI-2 Protein 1e-177 97
ORF48 CAA68204.1 amino acid permease YeeF like protein Not tested SPI-2 Protein 1e-173 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SBG_1218 YP_004730088.1 amino acid permease VFG0480 Protein 4e-178 97