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Name : topB (SBG_1151) Accession : YP_004730024.1 Strain : Salmonella bongori NCTC 12419 Genome accession: NC_015761 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : 5.99.1.2 Position : 1264086 - 1266014 bp Length : 1929 bp Strand : + Note : - DNA sequence : ATGCGGTTGTTTATTGCCGAAAAACCGAGCCTGGGACGCGCTATTGCGGATGTGCTGCCAAAGCCGCACCGTAAGGGGGA CGGTTTTATTGAATGCGGAAACGGGCAGGTGGTCACCTGGTGTATTGGTCATTTGCTGGAGCAGGCGCAGCCTGACGCGT ATGACAGCCGCTATGCGCGCTGGAGCCTGGCCGATCTGCCTATCGTACCCGAGAAATGGCAGCTTCAGCCTCGTCCTTCC GTCACCAAACAGCTCAATGTGATTAAACGCTTTCTGCAAGACGCTGGTGAAATTGTTCATGCCGGCGACCCGGATCGTGA AGGGCAGCTTCTGGTCGATGAAGTGCTGGACTATCTTCAACTTCCGGCCGAAAAGCGTCAGCGGGTGCAACGTTGTTTAA TAAACGATCTTAACCCGCAGGCGGTGGAGCGTGCTATCGACAGACTGCGTGCGAACAGCGACTTTGTGCCGCTGTGCGTT TCCGCGCTGGCGCGCGCGCGCGCGGACTGGCTGTATGGCATTAATATGACTCGCGCGTACACGATTCTGGGGCGTAATGC GGGCTATCAGGGCGTGTTATCTGTGGGGCGTGTACAGACGCCGGTACTTGGCCTGGTGGTGCGCCGGGATGAAGAGATTG AGAATTTCGTCGCCAAAGACTTCTTTGAAGTGAAGGCGCACATCGTTACGCCTGCCGACGAGCGTTTTACCGCTATCTGG CAGCCGAGCGAGGCGTGTGAACCTTATCAGGATGAAGAGGGACGGTTGCTTCATCGTCCGCTGGCGGAACATGTGGTGAA CCGGATCAACGGTCAGCCTGCGCTGGTAACCAGTTATAATGATAAACGGGAATCAGAATCCGCACCGTTACCTTTTTCGC TCTCGACGTTACAGATTGAAGCGGCCAAACGCTTTGGTCTGAGCGCGCAAAATGTGCTTGATATTTGTCAGAAACTGTAT GAAACCCACAAACTGATTACTTACCCACGTTCCGACTGCCGTTATCTGCCAGAGGAACATTTTGCCGGCCGCCACGCGGT GATGAAGGCGATTAGCGTCCACGCCCCGGATTTACTGCCGCAGCCTGTGGTTAATCCTGATACGCGCAATCGCTGCTGGG ATGACAAAAAAGTGGATGCGCACCACGCAATTATCCCGACGGCGCGCAGTTCTTCTGTCCACCTGACGGAAAATGAGGCG AAGGTCTACGCCCTGATTGCGCGCCAGTATTTGATGCAGTTCTGCCCGGACGCGGTGTTTCGTAAATGTGTTATTGAACT GGACATTGCCAAAGGGAAATTTGTCGCCAAAGCGCGTTTTCTGGCGGAGGCCGGTTGGCGGACGTTACTGGGCAGTAAAG AGCGCGACGAGGAGAACGACGGTACGCCGCTGCCGATTGTCGCGAAAGGAGATGAGTTACTGTGTGAAAAGGGCGAAGTG GTTGAACGGCAAACTCAGCCGCCGCGCCATTTCACCGATGCGACATTACTGTCCGCGATGACCGGAATTGCCCGCTTTGT GCAGGATAAAGATCTGAAAAAGATTCTGCGTGCGACCGATGGGCTGGGAACAGAAGCGACCCGTGCCGGGATTATTGAAC TGCTTTTCAAACGTAGCTTTCTGACGAAAAAAGGGCGCTACATTCATTCGACCGATGCTGGAAAAGCGCTGTTCCATTCG CTGCCAGAAATGGCGACTCGTCCGGATATGACGGCGCACTGGGAGTCTGTTCTGACGCAAATTAGCGAAAAACAGTGTCG CTATCAGGATTTTATGCAGCCGCTGGTAGGCACACTGTATCAGTTGATCGAGCAGGCGAAACGGACGCCGGTACGCCAGT TTCGCGGCATTATCGCCCCGGTGGGCGAAGGTAAGAAAAAAAGCGCGCCGCGTAAACGTCCGGCGAAAAAGAGCCCGCCC CAGGCCTGA Protein sequence : MRLFIAEKPSLGRAIADVLPKPHRKGDGFIECGNGQVVTWCIGHLLEQAQPDAYDSRYARWSLADLPIVPEKWQLQPRPS VTKQLNVIKRFLQDAGEIVHAGDPDREGQLLVDEVLDYLQLPAEKRQRVQRCLINDLNPQAVERAIDRLRANSDFVPLCV SALARARADWLYGINMTRAYTILGRNAGYQGVLSVGRVQTPVLGLVVRRDEEIENFVAKDFFEVKAHIVTPADERFTAIW QPSEACEPYQDEEGRLLHRPLAEHVVNRINGQPALVTSYNDKRESESAPLPFSLSTLQIEAAKRFGLSAQNVLDICQKLY ETHKLITYPRSDCRYLPEEHFAGRHAVMKAISVHAPDLLPQPVVNPDTRNRCWDDKKVDAHHAIIPTARSSSVHLTENEA KVYALIARQYLMQFCPDAVFRKCVIELDIAKGKFVAKARFLAEAGWRTLLGSKERDEENDGTPLPIVAKGDELLCEKGEV VERQTQPPRHFTDATLLSAMTGIARFVQDKDLKKILRATDGLGTEATRAGIIELLFKRSFLTKKGRYIHSTDAGKALFHS LPEMATRPDMTAHWESVLTQISEKQCRYQDFMQPLVGTLYQLIEQAKRTPVRQFRGIIAPVGEGKKKSAPRKRPAKKSPP QA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 1e-107 | 41 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 1e-107 | 41 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 9e-108 | 41 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 2e-110 | 41 |
