Gene Information

Name : pagC (SBG_1090)
Accession : YP_004729970.1
Strain : Salmonella bongori NCTC 12419
Genome accession: NC_015761
Putative virulence/resistance : Virulence
Product : outer membrane invasion protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG3637
EC number : -
Position : 1210607 - 1211164 bp
Length : 558 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAAAATTTATTATATCCACTTTAGTTGTTTCTGCAGGCGTCTTGGCTGCGAATGTTGCACAAGCCGATACGAATTC
GCTTTCCGTGGGGTATGCACAAAGTAAAGTTCAGGATTTTAAAAATATTCGTGGGGTCAATTTGAAATACCGTTATGAGA
CAGACTCCCCGGTAAGTTTCATCACCTCATTAAGCTATTTATCTGGAGATAGACAGAATTCGGATTCTGTTGAGCCTGAG
GGTATTTATTACCATGATAAGTTTGACGTAAAGTATGGCTCTTTAATGGTCGGGCCAGCTTATCGCCTGTCTGACAATTT
TTCATTATACGCACTGGCGGGTGTTGGTACAATGAAGGCTACATTTAAAGAACAATCCACTCAGGATGGTATGTCGGCTT
CATATAAAATGTCTTCAAGGAAAACGGGTTTTGCATGGGGGGCGGGTATCCAGATGAATCCGCTGGAGAATATTGTTATC
GATGTCGGGTATGAAGGAAGCACTATTTCTTCTACAAAAATAAACGGGTTCAACGTTGGGGTTGGGTACCGTTTCTAA

Protein sequence : 
MKKFIISTLVVSAGVLAANVAQADTNSLSVGYAQSKVQDFKNIRGVNLKYRYETDSPVSFITSLSYLSGDRQNSDSVEPE
GIYYHDKFDVKYGSLMVGPAYRLSDNFSLYALAGVGTMKATFKEQSTQDGMSASYKMSSRKTGFAWGAGIQMNPLENIVI
DVGYEGSTISSTKINGFNVGVGYRF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pagC YP_216243.1 PhoP regulated protein: reduced macrophage survival Not tested SPI-11 Protein 4e-70 85
Z4321 NP_289546.1 PagC-like membrane protein Not tested OI-122 Protein 2e-29 48
unnamed ADD91732.1 putative PagC-like membrane protein Not tested PAI-I AL862 Protein 1e-29 48
Z4321 AAQ19134.1 putative PagC-like membrane protein Not tested PAI I CL3 Protein 5e-29 47
pagC AGI37347.1 PagC Virulence OI-122 Protein 2e-20 43
pagC AGI37340.1 PagC Virulence OI-122 Protein 2e-20 43
pagC AGI37348.1 PagC Virulence OI-122 Protein 5e-21 43
pagC AGI37351.1 PagC Virulence OI-122 Protein 4e-21 43
pagC AGI37349.1 PagC Virulence OI-122 Protein 8e-20 42
pagC AGI37352.1 PagC Virulence OI-122 Protein 8e-20 42
pagC AGI37337.1 PagC Virulence OI-122 Protein 3e-20 42
pagC AGI37342.1 PagC Virulence OI-122 Protein 3e-20 42
pagC AGI37344.1 PagC Virulence OI-122 Protein 3e-20 42
pagC AGI37346.1 PagC Virulence OI-122 Protein 3e-20 42
pagC AGI37343.1 PagC Virulence OI-122 Protein 1e-19 42
pagC AGI37350.1 PagC Virulence OI-122 Protein 3e-20 42
pagC AGI37353.1 PagC Virulence OI-122 Protein 1e-19 42
pagC AGI37341.1 PagC Virulence OI-122 Protein 8e-20 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pagC YP_004729970.1 outer membrane invasion protein VFG0442 Protein 1e-40 56