|
Name : SBG_1083 (SBG_1083) Accession : YP_004729964.1 Strain : Salmonella bongori NCTC 12419 Genome accession: NC_015761 Putative virulence/resistance : Virulence Product : hemoglobin protease Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3468 EC number : - Position : 1200390 - 1204544 bp Length : 4155 bp Strand : + Note : - DNA sequence : ATGAATAAAATATACGCTCTGAAGTATAGCGTCAGGCAAGGCGCGCTTGTGCCTGTTTCCGAACTGGCAACCCACGTAAA AAAATCATCTCGCACAGGTTTGATAAAAAAAATTATTCCGTCGCTGCTCATTAATACCATTCTGTTAGGGTATTCGGTCT CATCGTTGGCCTCAGTAGTCAGGTATGATCTCCCTTACCAGACGATAAGAGATTTTTCTGAGAATAAAGGGCAATTCACG CCGGGCAGTTTGAATATTCCCATTTACAACAAAACAGACGCGATTATTGGCTATTTGAATAAAGCGCCAATGCCTGATTT CAGCAGTGCCAATCATCAGTCCGCGGTTGCTACTCTTGTTTCACCACAGTATATCGTAAGCGTAAAACATAATGGCGGTT ATCAAAGCGTCAGTTTTGGTGATGGCGAAAATAAATATCGTCTTGTTGACAGAAATAATCAGCCGGGACGAGATTTTCAT GCCCCACGTTTAAATAAGTTAGTTACAGAAGTTGAACCTTCTTTGATGACGCAGTCAGGGATGGTGTCTGGCGCTTATAG TGATAAAAATCGCTATCCCACATTCTACCGGATAGGGTCCGGGACCCAGGAAATTAAACAGACAGACGGGCAAATCATCT CCCTTTCCGGCGCATACAATTACCTGACCGGAGGAACGGCGGGTTCACTGGGGTCCTATGCTCAGGGCCAGATGATCAGT GCCAATACCAATAAACAGTTGTATAACCTGGCGCAGGGTCCAATGGGAACCCATCCCCGCAGTGGTGATAGCGGTTCACC TTTATTTGCCTATGATTCTGTTTTACAACAGTGGGTCATTGTTGGCGTGGATAGCTCCGGCGGTGGCGGAGGAACTAACT GGACGGTGGTTGATGCGGATTTTGTAAACCAGTCCATTCAGGAAGATACCGATGCGCCAGTAACCTTTGTGGCCGGGCAG GGGGCCTTACGCTGGGCATTTGACTCGACAGACGGCACGGGGACTCTTACCCAGCAAGAAACTGTTTATCAGATGCATGG TCAGAAAGACGCAGACCTGAATGCGGGTAAGAATCTGGTATTTAATGGTGCTGATGGCCAGATTGTCCTGGAAGACTCGG TTAACCAGGGGGCGGGGGCGCTGACGTTTAACGGCAATTATACAGTATCCACTAATAACGGCTCTACCTGGCAGGGCGCA GGTCTGGATATTTCCCGGGATGCGGAGGTGATATGGCAGGTGAACGGGGTTCAGGGCGACAACCTGCATAAGATTGGCGA GGGAGTGCTGAAGGTCAATGGTACCGGTATTAACCCGGGCGGGCTGAAGGTCGGGGATGGGACGGTTATTCTGGCTCAGC GTCCGGATGAGGACGGCAAGGCACAGGCCTTCAGTTCGGTGAATATCGCCAGTGGCCGACCCACGGTGGTTCTTACCGAC AGCCGGCAGGTTAATCCCGATAACATTAGCTGGGGGTTCAGGGGAGGCCGGCTTGATATAAACGGCAATGACGTCACTTT TCATAAACTTAACGCCGCGGATAATGGTGCGAATATCATTAATGCCAGCGATACCTTTGCCACCGTTTCAATTAAGCCCA TCACGGACATGACGGTGACGATTAATGACTGGGATAAAAATAAAGCTTCCGGCGGTGCTGCCGGGTTATTGTATAAATAT AATAATCCTTACGCCCATACAGTGGATTATTTTATCCAGAAGAGGAAAGGATATGGATTTTATCCTGTCAATCAGTCAGA TAACGACAGTTGGGAGTATGTCGGGCACAATGAGACGCAGGCCATTGAACAGGTAAAATCGCGGCGGCCCGTCGATGATC GGATGTATCATGGTAATCTTGCTGGCAATATTGATCTTAATATTGATACCTCTCGCAGTAGCGGCGGCGTTATTTTTGAT GGCAATATAGATACGCCTGAGGGCGGATTAATGCAGTCTGGGGGCCAACTGACGTTCCAGGGCCATCCGGTTATCCACGC CTATAATAATAAAGGAGTGGCAGATAAGCTTAAATCTCTTGGTGACGATTCGGTCAGGACTCAACCCACCTCTTTTGACC AGCCTGACTGGGAGGGCCGGACATTTCGTCTGAAAACGCTGTTGCTGAAAAATACCGATTTCGGCCTGGCCAGAAACGCG TCGCTGAACGGAGATATTGAGGCAGTGCATTCGTCCGTGACGCTGGGTACGCCGAATGTGTATATCGATCTGAATGACGG GAATGGCACAAAAGTAACGCCACAAAAGGGAACCTCAGTTGCCAGGCAAGACACGGACAGGAGCCGCTATGCCGGGAAAG TGACGCTTGGCGAACAATCAACTCTGGACGTACGTGAAATTTTCACCGGCAGTATCCAAAGTCAGGATAGCGCTGTCACG GTGTCCTCCCGCCATGCGACACTGGATGGTTACAGCCGGTTCGGCAACACGTCACTGGCTCTTCAGGAGGGAGCCCGATT GACCGCTACCGGTGGGTGGTGGAGTGATTCAGACGTCATTGTCGGACCAGCCGCTACGTTGAGTCTGGCCGGTACGTCCG TAACCGGCCAGCCGGGGCAGGTGAGTCCGGCGTTTTATTCCACCGATTATGGCGCAGGTTATCAACTGGATACCGGCAGC CAGTTACACTTCTCTCCCTACACTTTTGTCACGGGTGATATTCGGGCAAAGGGGGATACAGGGATCTCTATTGGTGGTGA GGACGGTGTTGCCCTGGCAGATAACCTGCCCCTGGGGGAACAGATGATGTACAGTCTGTTCAATGGCTTTCGAAACGTTT ATTCGGGTAATGTCAGCGTCCCGCAAGGGCGAATGACAATGACGGATACGCAGTGGCAAATGCCCGGTGATTCTCATACC GGCGCACTGCGTATGATACGGTCGCTGGCCGGCTTTACCGGTCGCGGATTTAATTCCCTGACTACGAATACGTTACAGGC CAACCAGTCCGCTTTTGCGCTCAGAACGGACCTGAAGGACAGCGACAAAATTGTGGTGAACCAGAAAGCAGAGGGCCGGG ATAACACCCTGTTTGTGAATTTCCTGAAAAAACCATCCGGGCAGGAGCCTCTGAATATTCCACTGGTCAGCGCCCCGGCG GGGACAAATCCGGCGATGTTTAAGGCCGCCGAGCGGGTGACCGGGTTTAGTCTGGTGACGCCGACTCTGCACACGACAGA ACAGGATGGCAAAATACAGTGGGTACTGGATGGCTTTAAGTCCGCGCCGGACAAGGGGTCAGCCACCTCGGCCAACAGCT TTATGGGCATGGGATATAAAAACTTCATGACCGAAGTCAACAACCTGAACAAGCGTATGGGGGATCTGCGTGATACTCAG GGCGAGGACGGAATGTGGGTACGTATCATGAACGGCGCCGGAACCGGTGACGCCGGATATTCTGATCGTTACACCCATCT GCAAACGGGGTTTGATAAAAAACACCGGTTGTCAGGTGCTGACTTGTTCACTGGTGTGTTGATGAGTTATACCGACAGCA GCGCCAGTGGACGGGCCTACAGCGGCGACACGCATTCGCTCGGGGGTGGGATGTACGCATCCGTGATGTTTGATTCGGGG ATATATATGGATGTTATCGGCAAGTATATTCATCATGATAATGACTATAACGCCGGTTTTGCTGGTCTGGGCAAACGGAA TTACGGTACACACTCATGGTATGCTGGCCTGGAAGGCGGATACCGTTACCGTCTGACAGAAAGCCTGTATATTGAGCCGC AGGCGGAACTGGTATATGGAACCGTCTCCGGAACAACGCTGAAATGGAATGATAATGGTATGGATGTGTCGATGCGCAGC AAAACGTATAATCCGTTGATAGGGCGTACAGGCGTGGCATTGGGCAAAACGTTCAGTGGCAAGGACTGGAGCGTTACGGC CCGTACAGGTGTGGATTACCAGTTTGACCTGGTGGCCAATGGCGAGACGGCGCTACGCGATGCCTCCGGCGAGAAACGTT TCACTGGTGAAAAAGACAGCAGAATGCTGTACAACGTGGGGCTGAATGCGCAGGTGAAGGACAATGTGCGCTTTGGACTG GAGCTGGAGCAGTCGGCATTTGGCAAATATAATGTTGACCATGCCATAAACGCCAACTTCCGCTACATGTTCTGA Protein sequence : MNKIYALKYSVRQGALVPVSELATHVKKSSRTGLIKKIIPSLLINTILLGYSVSSLASVVRYDLPYQTIRDFSENKGQFT PGSLNIPIYNKTDAIIGYLNKAPMPDFSSANHQSAVATLVSPQYIVSVKHNGGYQSVSFGDGENKYRLVDRNNQPGRDFH APRLNKLVTEVEPSLMTQSGMVSGAYSDKNRYPTFYRIGSGTQEIKQTDGQIISLSGAYNYLTGGTAGSLGSYAQGQMIS ANTNKQLYNLAQGPMGTHPRSGDSGSPLFAYDSVLQQWVIVGVDSSGGGGGTNWTVVDADFVNQSIQEDTDAPVTFVAGQ GALRWAFDSTDGTGTLTQQETVYQMHGQKDADLNAGKNLVFNGADGQIVLEDSVNQGAGALTFNGNYTVSTNNGSTWQGA GLDISRDAEVIWQVNGVQGDNLHKIGEGVLKVNGTGINPGGLKVGDGTVILAQRPDEDGKAQAFSSVNIASGRPTVVLTD SRQVNPDNISWGFRGGRLDINGNDVTFHKLNAADNGANIINASDTFATVSIKPITDMTVTINDWDKNKASGGAAGLLYKY NNPYAHTVDYFIQKRKGYGFYPVNQSDNDSWEYVGHNETQAIEQVKSRRPVDDRMYHGNLAGNIDLNIDTSRSSGGVIFD GNIDTPEGGLMQSGGQLTFQGHPVIHAYNNKGVADKLKSLGDDSVRTQPTSFDQPDWEGRTFRLKTLLLKNTDFGLARNA SLNGDIEAVHSSVTLGTPNVYIDLNDGNGTKVTPQKGTSVARQDTDRSRYAGKVTLGEQSTLDVREIFTGSIQSQDSAVT VSSRHATLDGYSRFGNTSLALQEGARLTATGGWWSDSDVIVGPAATLSLAGTSVTGQPGQVSPAFYSTDYGAGYQLDTGS QLHFSPYTFVTGDIRAKGDTGISIGGEDGVALADNLPLGEQMMYSLFNGFRNVYSGNVSVPQGRMTMTDTQWQMPGDSHT GALRMIRSLAGFTGRGFNSLTTNTLQANQSAFALRTDLKDSDKIVVNQKAEGRDNTLFVNFLKKPSGQEPLNIPLVSAPA GTNPAMFKAAERVTGFSLVTPTLHTTEQDGKIQWVLDGFKSAPDKGSATSANSFMGMGYKNFMTEVNNLNKRMGDLRDTQ GEDGMWVRIMNGAGTGDAGYSDRYTHLQTGFDKKHRLSGADLFTGVLMSYTDSSASGRAYSGDTHSLGGGMYASVMFDSG IYMDVIGKYIHHDNDYNAGFAGLGKRNYGTHSWYAGLEGGYRYRLTESLYIEPQAELVYGTVSGTTLKWNDNGMDVSMRS KTYNPLIGRTGVALGKTFSGKDWSVTARTGVDYQFDLVANGETALRDASGEKRFTGEKDSRMLYNVGLNAQVKDNVRFGL ELEQSAFGKYNVDHAINANFRYMF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pic | NP_838464.1 | serine protease precurser | Virulence | SHI-1 | Protein | 0.0 | 53 |
| she | AAB58244.1 | mucinase | Virulence | SHI-1 | Protein | 0.0 | 52 |
| pic | NP_708747.3 | serine protease | Not tested | SHI-1 | Protein | 0.0 | 52 |
| pic | AAK00464.1 | Pic | Virulence | SHI-1 | Protein | 0.0 | 52 |
| vat | YP_851472.1 | vacuolating autotransporter | Not tested | PAI III APEC-O1 | Protein | 0.0 | 51 |
| unnamed | CAD66214.1 | putative hemoglobin protease | Not tested | PAI III 536 | Protein | 0.0 | 51 |
| vat | AAO21903.1 | vacuolating autotransporter toxin | Virulence | Not named | Protein | 0.0 | 51 |
| unnamed | CAC39286.1 | hypothetical protein | Not tested | LPA | Protein | 0.0 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SBG_1083 | YP_004729964.1 | hemoglobin protease | VFG0635 | Protein | 0.0 | 52 |
| SBG_1083 | YP_004729964.1 | hemoglobin protease | VFG0861 | Protein | 0.0 | 52 |
| SBG_1083 | YP_004729964.1 | hemoglobin protease | VFG0903 | Protein | 0.0 | 52 |
| SBG_1083 | YP_004729964.1 | hemoglobin protease | VFG0904 | Protein | 0.0 | 51 |
| SBG_1083 | YP_004729964.1 | hemoglobin protease | VFG1689 | Protein | 0.0 | 51 |
