Gene Information

Name : SALIVB_1559 (SALIVB_1559)
Accession : YP_004728350.1
Strain : Streptococcus salivarius CCHSS3
Genome accession: NC_015760
Putative virulence/resistance : Virulence
Product : lipoprotein-releasing system ATP-binding protein lolD
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.-
Position : 1649073 - 1649777 bp
Length : 705 bp
Strand : -
Note : -

DNA sequence : 
GTGACTAAGCCAGCTCTTATGGTTTTAAAGGGGATCACCAAGTCTTTCAAAAATGGTCAAGAGTCCCTGCAGGTCCTCAA
GGGTATTGATTTGTCAGTTGAAGAAGGGGACTTTGTGGCAATCATGGGCCCTTCTGGTTCAGGGAAGTCAACCCTTATGA
ATATTATCGGTCTTCTTGATCAACCGACTACAGGTTCCTATCAACTCGAGGGCGAGGATGTGGCTGAACTCTCTGAAAAT
CGCCTAGCCAAGGTAAGAAATGACCAGATTGGCTTTATCTTTCAACAGTTTTTTCTCTTGCCAAAGTTAAGCGCCCAAAA
GAACGTAGAGCTTCCTTTGATTTATGCAGGGAAATCTCCACGTGAACGTAAGCAAAGGGCACAACAATTCTTGGAAAAAG
TTGGCTTGTCAGACCGTAGCCATCACCTACCATCGGAGCTGTCTGGTGGACAGAAGCAGAGGGTTGCCATTGCGCGTGCA
CTGTCTAACGATCCGGCAATCATTTTGGCGGATGAACCTACAGGTGCTCTTGATACCAAGACAGGGATGCAGATTATGGA
ACTCTTAACCCAGCTGAACCGTGAGGGAAAGACTATCATCATGGTTACTCATGAGCCAGAGATTGCAGACTATGCCCGAC
GTAAGATTGTCATCCGCGATGGGGAAATTACCCAGGACACGACGGACAGCGTTCGGATTGACTAG

Protein sequence : 
MTKPALMVLKGITKSFKNGQESLQVLKGIDLSVEEGDFVAIMGPSGSGKSTLMNIIGLLDQPTTGSYQLEGEDVAELSEN
RLAKVRNDQIGFIFQQFFLLPKLSAQKNVELPLIYAGKSPRERKQRAQQFLEKVGLSDRSHHLPSELSGGQKQRVAIARA
LSNDPAIILADEPTGALDTKTGMQIMELLTQLNREGKTIIMVTHEPEIADYARRKIVIRDGEITQDTTDSVRID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-34 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-35 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-35 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-35 42
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 8e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SALIVB_1559 YP_004728350.1 lipoprotein-releasing system ATP-binding protein lolD NC_012469.1.7686878. Protein 5e-73 72
SALIVB_1559 YP_004728350.1 lipoprotein-releasing system ATP-binding protein lolD NC_008702.1.4606598. Protein 7e-43 51
SALIVB_1559 YP_004728350.1 lipoprotein-releasing system ATP-binding protein lolD CP001581.1.gene798.p Protein 2e-36 45
SALIVB_1559 YP_004728350.1 lipoprotein-releasing system ATP-binding protein lolD CP001581.1.gene598.p Protein 1e-30 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SALIVB_1559 YP_004728350.1 lipoprotein-releasing system ATP-binding protein lolD VFG0869 Protein 6e-24 41