Gene Information

Name : WKK_04615 (WKK_04615)
Accession : YP_004726474.1
Strain : Weissella koreensis KACC 15510
Genome accession: NC_015759
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease ATP-binding subunit
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 967341 - 969407 bp
Length : 2067 bp
Strand : +
Note : COG0542 ATPases with chaperone activity, ATP-binding subunit

DNA sequence :
ATGGCAAATTATGATCCATTTAGTTTCTCGAATTTTGATGATATTTTTAATGCAATGAATGGAACCAGTGATTCAGCAGC
AAGACAGCGTGCACAAATGCAACGAGCGCAGATGCAACAACGAGCTGCGCAAGAACAAGCTAGCCGTCAGCGACAAGCTG
AAGTTGCAGACAGTCAAAAAAATGAAGGTTTACTCGAACAGTTTGGAATTAATATGACCGAAATGGCCCGGAAAGGTAAA
TTTGATCCGGTAATTGGACGTGATGATGAAATAAAACGAGTTGTCGAAATATTAAATCGAAGAACTAAGAATAATCCGGT
TTTGATTGGAGAGGCTGGGGTCGGTAAGACGGCCGTTGTAGAAGGTTTAGCTCAAGCAATTGTTGATGGTCAGGTGCCAG
TTAAGTTGCAAGGTAAAGAAGTGATTCGTCTGGATGTCGTCTCAATGGTTCAAGGAACTGGCGTTCGCGGGCAATTCGAA
GAGCGGATGCAAAAGCTGATGGAAGAAGTCACTAAGCGCGAAGACGTAATTTTGTTTATTGATGAAATTCATGAAATTAT
GGGCGCTGGAGCTGCGGGCGAAGGTGGCATGGATGCTGGAAATATTTTGAAGCCAGCCCTTGCTCGTGGTGAGTTCCAAC
TTATTGGAGCAACAACTTTAAATGAATATCGCCAAATTGAGAAAGATGCAGCTATTGCTCGACGGTTCCAAACGGTTCAA
GTTGATGAACCTAGTGCAGAAGAAGCGTTACAGATTTTGGAAGGAATTCGTGGACGTTACGAAGATTATCATAAAGTTAA
GTACAGTGACGAAGCGCTTAAGGCGGCTGTTGAATTATCGAGTCGTTATATTCCAGAACGCTTCTTGCCTGATAAGGCAA
TTGATTTAATAGATGAAGCCGGCTCACGAAAGAATTTGGAAGTGAAAGTGGATGATCCCAAGAAGCTAGAGAATCAGATT
AAGTATGCTGAGAATATGAAGCAGCAATCAATTGACGCTGAGGATTATGAGAAGGCTGGTTATTGGAAGTCGCAAGTTGA
GCAATTGAATCGACAAAAGCAAGCAGCCAAAGATTCACAACCAATTGATGGTAAAACTCAAGTTATTGACGTAGAAGACA
TTCAAAAAATCGTGGAAGAAAAGACAAAAATTCCAGTTGGTGATTTGCAGAATGCGGAGCAAAAACAATTGCAAAATTTG
GCTAATAATTTAGCAGATCATGTGATTGGACAAGAAGAGGCGACGACCAAAGTTGCTCGCGCTATTCGTCGAAATCGAGT
TGGATTTAATAAGGCCAATCGACCAATTGGAAGTTTCTTATTTGTCGGTCCAACTGGGGTTGGTAAAACAGAAACAGCTA
AGCAATTAGCAAAAGAATTATTTGGAACTACTGATAGTTTGATTCGATTTGATATGTCAGAATATATGGAAAAACATAGT
GTTTCTAAGTTGATTGGAGCACCAGCCGGTTATATAGGTTATGATGAAGCAGGTCAATTAACTGAGGCAGTACGCCGTAA
TCCGTATTCATTGATTTTGCTGGATGAGGTGGAAAAAGCTCATCCGGATGTGATGAATATGTTCTTGCAAATTTTGGACG
ATGGTCGTTTGACTGATGCTCAAGGGCACACCGTTTCGTTTAAAGATACGATTATTATTATGACATCGAACGCTGGAACA
CAAAATCATTTGGATGATGATAAAAATGAAACCAAATTGATGGAACGTTTGGCTCCGTACTTTAAGCCAGAATTTTTGAA
TCGATTTGATGGGATTGTAGAATTTAATGCTTTAACAAAGCTTGATTTGATGAAGATTGTACAATTAATGTTAGGTGACA
TGAATAAGATGATTGAACCAACTGGATTGACGATCAAGGTCGATGATGATGTTAAAGCTAAGTTAGTTGATTTGGGCTTT
GATCCAGCGATGGGTGCACGTCCATTACGACGAGTAATTCAAGAACAATTAGAGGATCAAATTGCTGACTTTTATCTTGA
TAATCCATCTGAACATGAATTGGAAGCAAAATTGGAAGATGATAAAATTGTAATTAAAGGTGTGTAA

Protein sequence :
MANYDPFSFSNFDDIFNAMNGTSDSAARQRAQMQRAQMQQRAAQEQASRQRQAEVADSQKNEGLLEQFGINMTEMARKGK
FDPVIGRDDEIKRVVEILNRRTKNNPVLIGEAGVGKTAVVEGLAQAIVDGQVPVKLQGKEVIRLDVVSMVQGTGVRGQFE
ERMQKLMEEVTKREDVILFIDEIHEIMGAGAAGEGGMDAGNILKPALARGEFQLIGATTLNEYRQIEKDAAIARRFQTVQ
VDEPSAEEALQILEGIRGRYEDYHKVKYSDEALKAAVELSSRYIPERFLPDKAIDLIDEAGSRKNLEVKVDDPKKLENQI
KYAENMKQQSIDAEDYEKAGYWKSQVEQLNRQKQAAKDSQPIDGKTQVIDVEDIQKIVEEKTKIPVGDLQNAEQKQLQNL
ANNLADHVIGQEEATTKVARAIRRNRVGFNKANRPIGSFLFVGPTGVGKTETAKQLAKELFGTTDSLIRFDMSEYMEKHS
VSKLIGAPAGYIGYDEAGQLTEAVRRNPYSLILLDEVEKAHPDVMNMFLQILDDGRLTDAQGHTVSFKDTIIIMTSNAGT
QNHLDDDKNETKLMERLAPYFKPEFLNRFDGIVEFNALTKLDLMKIVQLMLGDMNKMIEPTGLTIKVDDDVKAKLVDLGF
DPAMGARPLRRVIQEQLEDQIADFYLDNPSEHELEAKLEDDKIVIKGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 1e-137 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
WKK_04615 YP_004726474.1 ATP-dependent Clp protease ATP-binding subunit VFG0080 Protein 0.0 61
WKK_04615 YP_004726474.1 ATP-dependent Clp protease ATP-binding subunit VFG0079 Protein 2e-141 50