Gene Information

Name : WKK_02505 (WKK_02505)
Accession : YP_004726054.1
Strain : Weissella koreensis KACC 15510
Genome accession: NC_015759
Putative virulence/resistance : Resistance
Product : DNA-binding response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 519610 - 520314 bp
Length : 705 bp
Strand : -
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGAGTAAGATTTTAGTCGTTGATGACGAAAAACCGATTTCAGATATTATTAAATTCAATCTAACTAAAGAAGGTTATGA
TGTTGTCATTGCAATGGATGGTCAGGAAGCTTTAGACCAATTTGAGGCTGAAAATCCTGATTTAGTATTGTTAGATCAAA
TGTTACCAGAAGTCGATGGGATGGAAGTTTTACGACAAATTCGAACGAACTCGCAAATCCCAGTCATTATGGTAACGGCA
AAAGATTCTGAGATTGATAAAGTTTTGGGACTTGAAATGGGGGCGGATGACTATGTCACTAAGCCTTTTTCAAATCGAGA
ATTATTAGCTCGAGTTAAAGCTAATTTACGGCGTCGCGATAGTAAAGACTATAATGGCGAAAATGAAAATAATTCCGATG
ATATTAAGATTGGTGACTTAGTGATTCATCCGGAAGCTTACATGGTAACTAAAAATGGTAAGGATATTGAATTGACTCAT
CGTGAGTTTGAATTGTTATCGCATTTAGCTAAGCATATTAGCCAAGTTATGACACGTGATGATTTATTACAGACGGTTTG
GGGTTTTGATTATTTTGGTGATGTACGGACTGTTGATGTGACCGTCCGTCGAATTCGTGAAAAAATTGAAGACACACCAA
GTCATCCAAAAATATTGATGACTCGTCGTGGTGTTGGTTACTATTTGAAGAATTCAGAAGAATAA

Protein sequence : 
MSKILVVDDEKPISDIIKFNLTKEGYDVVIAMDGQEALDQFEAENPDLVLLDQMLPEVDGMEVLRQIRTNSQIPVIMVTA
KDSEIDKVLGLEMGADDYVTKPFSNRELLARVKANLRRRDSKDYNGENENNSDDIKIGDLVIHPEAYMVTKNGKDIELTH
REFELLSHLAKHISQVMTRDDLLQTVWGFDYFGDVRTVDVTVRRIREKIEDTPSHPKILMTRRGVGYYLKNSEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 5e-30 42
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 8e-34 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 4e-34 42
nisR2 YP_006309922.1 NisR Not tested FWisland_1 Protein 4e-22 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
WKK_02505 YP_004726054.1 DNA-binding response regulator NC_012469.1.7685629. Protein 1e-70 67
WKK_02505 YP_004726054.1 DNA-binding response regulator NC_002952.2859905.p0 Protein 1e-48 50
WKK_02505 YP_004726054.1 DNA-binding response regulator NC_007793.3914279.p0 Protein 7e-49 50
WKK_02505 YP_004726054.1 DNA-binding response regulator NC_007622.3794472.p0 Protein 1e-48 50
WKK_02505 YP_004726054.1 DNA-binding response regulator NC_002745.1124361.p0 Protein 7e-49 50
WKK_02505 YP_004726054.1 DNA-binding response regulator NC_009782.5559369.p0 Protein 7e-49 50
WKK_02505 YP_004726054.1 DNA-binding response regulator NC_002951.3237708.p0 Protein 7e-49 50
WKK_02505 YP_004726054.1 DNA-binding response regulator NC_003923.1003749.p0 Protein 7e-49 50
WKK_02505 YP_004726054.1 DNA-binding response regulator NC_002758.1121668.p0 Protein 7e-49 50
WKK_02505 YP_004726054.1 DNA-binding response regulator NC_009641.5332272.p0 Protein 7e-49 50
WKK_02505 YP_004726054.1 DNA-binding response regulator NC_013450.8614421.p0 Protein 7e-49 50
WKK_02505 YP_004726054.1 DNA-binding response regulator HE999704.1.gene2815. Protein 4e-45 49
WKK_02505 YP_004726054.1 DNA-binding response regulator NC_012469.1.7686381. Protein 6e-42 47
WKK_02505 YP_004726054.1 DNA-binding response regulator CP000034.1.gene3834. Protein 1e-31 45
WKK_02505 YP_004726054.1 DNA-binding response regulator CP004022.1.gene3215. Protein 2e-34 45
WKK_02505 YP_004726054.1 DNA-binding response regulator NC_002695.1.915041.p Protein 1e-31 45
WKK_02505 YP_004726054.1 DNA-binding response regulator AF155139.2.orf0.gene Protein 5e-37 44
WKK_02505 YP_004726054.1 DNA-binding response regulator AE000516.2.gene3505. Protein 6e-36 44
WKK_02505 YP_004726054.1 DNA-binding response regulator CP000647.1.gene4257. Protein 1e-30 44
WKK_02505 YP_004726054.1 DNA-binding response regulator CP001138.1.gene4273. Protein 1e-30 44
WKK_02505 YP_004726054.1 DNA-binding response regulator BAC0533 Protein 1e-30 44
WKK_02505 YP_004726054.1 DNA-binding response regulator NC_002758.1121390.p0 Protein 5e-35 43
WKK_02505 YP_004726054.1 DNA-binding response regulator NC_010079.5776364.p0 Protein 5e-35 43
WKK_02505 YP_004726054.1 DNA-binding response regulator NC_002952.2859858.p0 Protein 5e-35 43
WKK_02505 YP_004726054.1 DNA-binding response regulator NC_007622.3794948.p0 Protein 5e-35 43
WKK_02505 YP_004726054.1 DNA-binding response regulator NC_003923.1003417.p0 Protein 5e-35 43
WKK_02505 YP_004726054.1 DNA-binding response regulator NC_013450.8614146.p0 Protein 5e-35 43
WKK_02505 YP_004726054.1 DNA-binding response regulator AE015929.1.gene1106. Protein 2e-31 43
WKK_02505 YP_004726054.1 DNA-binding response regulator NC_002951.3238224.p0 Protein 5e-35 43
WKK_02505 YP_004726054.1 DNA-binding response regulator NC_007793.3914065.p0 Protein 5e-35 43
WKK_02505 YP_004726054.1 DNA-binding response regulator CP001485.1.gene721.p Protein 9e-29 43
WKK_02505 YP_004726054.1 DNA-binding response regulator AE016830.1.gene1681. Protein 8e-40 42
WKK_02505 YP_004726054.1 DNA-binding response regulator FJ349556.1.orf0.gene Protein 4e-38 42
WKK_02505 YP_004726054.1 DNA-binding response regulator HE999704.1.gene1528. Protein 5e-30 42
WKK_02505 YP_004726054.1 DNA-binding response regulator NC_005054.2598277.p0 Protein 5e-36 41
WKK_02505 YP_004726054.1 DNA-binding response regulator NC_014475.1.orf0.gen Protein 5e-36 41
WKK_02505 YP_004726054.1 DNA-binding response regulator AM180355.1.gene1830. Protein 8e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
WKK_02505 YP_004726054.1 DNA-binding response regulator VFG0596 Protein 2e-30 42
WKK_02505 YP_004726054.1 DNA-binding response regulator VFG1563 Protein 5e-34 42
WKK_02505 YP_004726054.1 DNA-binding response regulator VFG1702 Protein 2e-34 42
WKK_02505 YP_004726054.1 DNA-binding response regulator VFG1389 Protein 1e-31 42