Gene Information

Name : TPY_2473 (TPY_2473)
Accession : YP_004720376.1
Strain : Sulfobacillus acidophilus TPY
Genome accession: NC_015757
Putative virulence/resistance : Resistance
Product : arsenical pump membrane protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1055
EC number : -
Position : 2297952 - 2299250 bp
Length : 1299 bp
Strand : +
Note : -

DNA sequence :
ATGAGCCATGCTGGGATTGCTGCTCTCATCTTTATCGCCACCTTGACCTTCGTCATTTGGCAACCCCGGGGCCTTTCCAT
TGGTTGGCCTGCTACCGTCGGTGCCATTTTGGCCTGGGCGCTTCATATTGTCTCGTGGCCGGATGTCCTGACGGTGTTTC
ATATCGTCTGGGACGCGACACTCGCCTTCGTCGGTATCATTTTAATTGCGACCGTGCTGGATCACTTAGGGTTTTTCGAA
TGGGCGGCCTTAATTTTGGCTCATCGGGCGCGTGGCAACGGTCGGGCCGTATTTTTCGGCGTCATTCTTTTGGGCGCTGT
CGTATCGGCCCTTTTTGCCAATGACGGTGCCGCCCTGATTCTGACTCCCATCGTTTTAGAAAAAATTCAACTGCTGGAAT
TTAAGCCGCGTCATATGATTCCCTTTATTATGGCCGGGGGGTTCGTGAGCGATACGACCTCCATCCCTTTTACCATCAGT
AACCTTGTCAATATTGTCTCCGCCGACTACTTTCATGTGGGCTTTTTGGCCTATGCCGGCCGTATGATGGTGCCCGACCT
CGTATCCTTAATCGCTACCGCGGGATTTCTTTATCTCTATTACCGACGCGATATTCCGGCCCGCTACCGACCGGATCGCT
TGCCCCTTCCTGCCGATGCGATTAAAAATCCCGCCATGTTTCGCTGGTCATGGTGGGTCCTCGGAATATTGGTGATGGGC
TATGTGATGAGCGACCTCGGGCATTTCCCGGTGTCTCTGGTGGCCTTGGCGATTGCCGCCGGGTTTTTGGCTCTGGCCCG
TCATTATCGCGTGGGTTCAATCCGGGAAATGATTCAAGAGGCCCCCTGGGCCATTATCGTCTTTTCCCTGGGCATGTATG
TGGTCGTCTTCGGAATCGGCCATGCCGGCCTGACCAAAATCCTGGCGAGCCAGCTAGCCCTTAGCGGTCGGTACGGGCTA
ATCGCCGCCACGATCTTCACCGGATTGGTGGCCGCGTTCTTGTCCAGCGTCATGAATAACCTGCCCACGGTGATGATTAA
TGCCTTGGCGATTCATGCCGCACACGTCACCCCGGTGATTCGTCAGGCGATGATTTATGCCAATGTCGTCGGGTCTGATC
TCGGTCCGAAACTGACCCCGATTGGTTCCTTAGCCACCTTGCTCTGGCTCCACGTGCTGAAAAAACGGGGTCTCACCATT
ACGTGGGGCCAATATACCCGGGTCGGTCTGGCCCTGACCATCCCCATTTTAATGCTCACCCTACTGGGATTGGGGGTCTG
GTTGGTGTGGGTCGAATAA

Protein sequence :
MSHAGIAALIFIATLTFVIWQPRGLSIGWPATVGAILAWALHIVSWPDVLTVFHIVWDATLAFVGIILIATVLDHLGFFE
WAALILAHRARGNGRAVFFGVILLGAVVSALFANDGAALILTPIVLEKIQLLEFKPRHMIPFIMAGGFVSDTTSIPFTIS
NLVNIVSADYFHVGFLAYAGRMMVPDLVSLIATAGFLYLYYRRDIPARYRPDRLPLPADAIKNPAMFRWSWWVLGILVMG
YVMSDLGHFPVSLVALAIAAGFLALARHYRVGSIREMIQEAPWAIIVFSLGMYVVVFGIGHAGLTKILASQLALSGRYGL
IAATIFTGLVAAFLSSVMNNLPTVMINALAIHAAHVTPVIRQAMIYANVVGSDLGPKLTPIGSLATLLWLHVLKKRGLTI
TWGQYTRVGLALTIPILMLTLLGLGVWLVWVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 2e-100 54
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 4e-89 52
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 5e-99 52
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 5e-97 51

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TPY_2473 YP_004720376.1 arsenical pump membrane protein BAC0577 Protein 7e-90 52
TPY_2473 YP_004720376.1 arsenical pump membrane protein BAC0574 Protein 2e-99 52
TPY_2473 YP_004720376.1 arsenical pump membrane protein BAC0031 Protein 5e-85 52
TPY_2473 YP_004720376.1 arsenical pump membrane protein BAC0575 Protein 3e-100 52
TPY_2473 YP_004720376.1 arsenical pump membrane protein BAC0576 Protein 3e-85 51
TPY_2473 YP_004720376.1 arsenical pump membrane protein BAC0578 Protein 7e-85 51