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Name : lysS (TPY_0241) Accession : YP_004718199.1 Strain : Sulfobacillus acidophilus TPY Genome accession: NC_015757 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 251432 - 252922 bp Length : 1491 bp Strand : + Note : - DNA sequence : GTGTCGGAAGCCGAAGGGCATTATAGCCCGCGTCAGGTGCGGCTGGAAAAATTAGCGGCGATGCGTCAACGAGGGGTGGA TCCGTTTCGGGAGACGGTCTACCCCGTTACGGCGTATAGTCGTCAAATTGTCGACGGGTTTTCGGAATACGAGGGGCAAA CGGTGCGGGTGGCGGGACGGATTATGGCGATTCGCCATCACGGGCGTGCACAATTTATCGACTTACACGACCAAGAGGGC CGGATTCAATGTCATTTACGGGCAGACAAACTCGGGGACGACGCCTATCAAATCGCGGATCTTTTGGATCTGGGCGATAT TGTCGGGATTGAGGGGGTCGTGTTTAAGACCCGCCGAGGAGAGGTCACGGTGGAAGCCGGTACGTTAACCGTACTGGCCA AGAGTTTACAGGACATGCCCGAAAAACGGCATGGGCTGACGAATATTGATTTACGGTACCGTCAACGGTATCTGGATCTT TTGGTCAATCCGGATGTCCGCCGGGTTTTTGCCCTGCGCACGCAGATTCTCCAATTCATTCGGACCTTTTTGCAAGGGCG GGGCTTTATGGAAGTGGAAACTCCGGTGTTACAGCCGCTTGCGGGGGGAACCGAAGCCCGTCCGTTTGTTACGCATCATA ACGCGCTCGATATGACGCTTTACCTGCGGATTGCCATGGAACTGCATTTAAAGCGGTTAATCGTTGGCGGATTTGATCGC GTCTACGAATTGGGGCGGGTATTTCGCAACGAAGGGATATCCACCCGGCATAACCCGGAGTTTACGATGTTGGAGCTATA CCAAGCGTACACGGACTATCAAGGGATGATGGAGCTGACCGAATCCTTATTGCACGGGCTGGCGTTGGCTCTATTTGGAC AGGCTACGGTTGAATACCAAGGCACGACACTCGACTTTACGCCCCCCTACCCGAGGGTGGATCTCGTCGCCCGTTTTCGG GAGAAAACCGGCGTCGACTGGCAAAGCGTGCACTCGCGTGAAGACGCGCACCAACTGGCGCGGCGTTTAGGGATTCAGGT CGATCCGGCCTTTGACCGAGCACAGGTATTGGACAAGATTGTGGGGCAGGTGGTCGAACCTGATCTGGTCCAACCGACGT TTCTTTGGCATCATCCGGTGGATATCTCGCCATTAGCCAAACGCGATCCGGAGGCCCCTTGGCTGACCGAGCGCTTTGAA TTGTTTGTGGCCGGGCGCGAGTTGGCGAACGCGTTTTCCGAATTGAACGATCCGCTTGATCAACGCGAGCGGTTTTTAAT CCAACAAGAGGCGCGGCGCGCCGGTAATGACGAAATTCCGCCGTTGGACGAGGATTTTCTTCTGGCGCTGGAGCATGGTA TGCCGCCGACCGGAGGGCTTGGCATCGGGATTGACCGGTTAGTGATGTTAATGACCAATAGCCCGTCCATTCGGGACGTC ATCTTTTTCCCCACGATGCGTCCATTGGCGAGTGACGAGGAGTCCGGCTAG Protein sequence : MSEAEGHYSPRQVRLEKLAAMRQRGVDPFRETVYPVTAYSRQIVDGFSEYEGQTVRVAGRIMAIRHHGRAQFIDLHDQEG RIQCHLRADKLGDDAYQIADLLDLGDIVGIEGVVFKTRRGEVTVEAGTLTVLAKSLQDMPEKRHGLTNIDLRYRQRYLDL LVNPDVRRVFALRTQILQFIRTFLQGRGFMEVETPVLQPLAGGTEARPFVTHHNALDMTLYLRIAMELHLKRLIVGGFDR VYELGRVFRNEGISTRHNPEFTMLELYQAYTDYQGMMELTESLLHGLALALFGQATVEYQGTTLDFTPPYPRVDLVARFR EKTGVDWQSVHSREDAHQLARRLGIQVDPAFDRAQVLDKIVGQVVEPDLVQPTFLWHHPVDISPLAKRDPEAPWLTERFE LFVAGRELANAFSELNDPLDQRERFLIQQEARRAGNDEIPPLDEDFLLALEHGMPPTGGLGIGIDRLVMLMTNSPSIRDV IFFPTMRPLASDEESG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-95 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_004718199.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 1e-95 | 48 |
