Gene Information

Name : TPY_2264 (TPY_2264)
Accession : YP_004720173.1
Strain : Sulfobacillus acidophilus TPY
Genome accession: NC_015757
Putative virulence/resistance : Virulence
Product : RNA-directed DNA polymerase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3344
EC number : -
Position : 2121611 - 2122855 bp
Length : 1245 bp
Strand : -
Note : -

DNA sequence :
ATGGATAAGCCCAAACCGTATGCCATTTCCAAATGGCTCGTGTATGAAGCGTATCAACGCGTGAAAGCAAACCATGGCGC
CGCAGGCGTCGATGGGGAAAGCCTGCGGAGGTTTGAGGAGGACCTGAAGAACAATCTGTACAAAATCTGGAACCGGATGT
CGTCGGGGAGCTACTTTCCCCCGCCGGTGAAGGCCGTGGAAATTCCCAAGAAATCTGGCGGGGTCCGCATTCTCGGGGTG
CCCACGGTGGCCGACCGGATTGCCCAGATGGTGGTCAAACTTACGTTTGAGCCCCTCGTTGAACCGATCTTTCATCCCGA
CTCGTACGGGTATCGCCCCGGACGGTCGGCCCATGATGCGTTGGCGCAAACCCGCCAACGGTGTTGGCGATACGACTGGG
TGCTCGAGTTCGACATTAAGGGCCTCTTCGATAACATTCCGCACGACTTGCTGATGAAAGCGGTGCGCCAGCACACCGAC
AACCCCTGGGGGCTCCTATACATCGAGCGCTGGCTGGTCGCCCCTTTACAGCGAGCCGACGGCTCGCAGGAACCGCGCAC
ATGCGGCACTCCACAGGGGTCCGTGATTAGTCCAGTACTCGCTAATCTCTTTCTCCATTACGCCTTTGACGTCTGGATGA
GTCGGCGGCACGCCGACAAGCCCTTTGAGCGGTACGCTGACGATGCCGTGGTGCATTGTCGGTCGTACGCCTTAGCGGCG
GCGCTCAAAGAAGACCTGGCGCGGCGATTGGCAGGATGTGGATTGGAGTGGCATCCCACGAAAACCCGGATTGTCTATTG
CCAAGACGATGATCGACGGGACACATACCCGGAGACCAGTTTCGACTTTCTCGGGTACACATTCCGCCCCCGACGGTCCA
AGAATCGGCATGGCAAATACTTCATCAACTTCACGCCTGCGGGCAGTCGCACGGCACTCACCGCCATGCGGCAGACAATT
CATGGCTGGCGTCTGCATCTGCAGGTGCATCGGAACCTGTCGGAGCTCGCGCGCCAATATAACCCGGTCATCCGGGGTTG
GCTACAATACTACGGGCGCTTTTACCCCTCTGCGTTGTATCCGCTTCTCCGGCATCTGAATCGGGTGTTGGTCCGATGGG
CCACCCGCAAATTCAAGCGACTGGAGCACCGCCAACGCCGGGCCGAACACTGGCTCGGCGGGGTTGCCCAACGCGACACA
CAACTCTTCAGCCACTGGCCTAAGGTTCGACCGGCGGTGAGATAG

Protein sequence :
MDKPKPYAISKWLVYEAYQRVKANHGAAGVDGESLRRFEEDLKNNLYKIWNRMSSGSYFPPPVKAVEIPKKSGGVRILGV
PTVADRIAQMVVKLTFEPLVEPIFHPDSYGYRPGRSAHDALAQTRQRCWRYDWVLEFDIKGLFDNIPHDLLMKAVRQHTD
NPWGLLYIERWLVAPLQRADGSQEPRTCGTPQGSVISPVLANLFLHYAFDVWMSRRHADKPFERYADDAVVHCRSYALAA
ALKEDLARRLAGCGLEWHPTKTRIVYCQDDDRRDTYPETSFDFLGYTFRPRRSKNRHGKYFINFTPAGSRTALTAMRQTI
HGWRLHLQVHRNLSELARQYNPVIRGWLQYYGRFYPSALYPLLRHLNRVLVRWATRKFKRLEHRQRRAEHWLGGVAQRDT
QLFSHWPKVRPAVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13526.1 reverse transcriptase Not tested PAGI-7 Protein 5e-124 59
unnamed CAD33771.1 putative reverse transcriptase Not tested PAI I 536 Protein 2e-88 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TPY_2264 YP_004720173.1 RNA-directed DNA polymerase VFG1512 Protein 9e-89 47