Gene Information

Name : lolD (TPY_1743)
Accession : YP_004719667.1
Strain : Sulfobacillus acidophilus TPY
Genome accession: NC_015757
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1643031 - 1643720 bp
Length : 690 bp
Strand : -
Note : -

DNA sequence : 
ATGAATGCCCTGATCCGGTTACAAGAGGTTAAAAAGTCTTATCGTCTCGGTGCCGAGGTCCTAGAAGTCTTACACGGGAT
CGATTTAACCGTTCAATCGGGAGAGTATGTGACGATCATGGGCCCCTCCGGGTCCGGTAAATCAACGTTGATGCATATTC
TGGGGTGCCTCGATCTCCCCTCGGCGGGCGAATATTGGTTTGAAGACCAACCGCTTTCGCGGTTGGGGGAGGCCGCTCTG
ACCCCCATTCGTCGCCAAAAAATCGGGTTTGTGTTCCAAAGTTTTAATCTGCTGCCCACCTTGACGGCGATTGAAAACGT
CGCGTTACCGCTCTTATATCAACGGGTCGACGGCCGCCTGCGATTGGAGCGTGCCCGCCAAGCGCTCGAACGTGTCGGTC
TGGGGCACCGCATGCAATATCGGCCCAATCAGTTGTCCGGCGGGCAACAGCAGCGGGTCGCGATTGCGCGGGCCTTAGTC
ACCGATCCGCCATTAATTCTCGCGGATGAGCCGACCGGCAATCTCGATACCCCAACCGGTCAGGACGTGTTGGAGCTCCT
GCAATCCCTTCACCGAGAAGGACATACCATTGTGTTGATTACCCACGATGTCAAGGTGGCCGGTTGGGGTCAACGGGTTG
TGGAAATTCAAGACGGCCGAATTATCGGGGATAGACAGGTGTCAGCATGA

Protein sequence : 
MNALIRLQEVKKSYRLGAEVLEVLHGIDLTVQSGEYVTIMGPSGSGKSTLMHILGCLDLPSAGEYWFEDQPLSRLGEAAL
TPIRRQKIGFVFQSFNLLPTLTAIENVALPLLYQRVDGRLRLERARQALERVGLGHRMQYRPNQLSGGQQQRVAIARALV
TDPPLILADEPTGNLDTPTGQDVLELLQSLHREGHTIVLITHDVKVAGWGQRVVEIQDGRIIGDRQVSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-34 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_004719667.1 ABC transporter NC_012469.1.7686878. Protein 2e-53 52
lolD YP_004719667.1 ABC transporter NC_008702.1.4606598. Protein 1e-43 47
lolD YP_004719667.1 ABC transporter CP001581.1.gene598.p Protein 2e-40 43
lolD YP_004719667.1 ABC transporter CP001581.1.gene798.p Protein 9e-39 43