Gene Information

Name : TPY_1498 (TPY_1498)
Accession : YP_004719425.1
Strain : Sulfobacillus acidophilus TPY
Genome accession: NC_015757
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1418412 - 1419092 bp
Length : 681 bp
Strand : +
Note : -

DNA sequence : 
GTGAAAGTCTTGTTAGTTGAGGATGACCAGCGGATTGCGACATTACTGCAAAAAGGGCTGACTAAAAACGGCCATGTGGC
CGAAACGGCTCTCACGGCCCGGGAGGCCTACCGGCGACTCGCGGACGGGGTATTTGACGTGATGGTATTGGATGTCAAAT
TGCCCGATGATGACGGATTTGCCGTGTTAGAACGCGTGCGGCGGGACGGTTTGGAAATTCCGGTCTTGATGCTGACCGCC
CGCGATAGTGTGGACGACAAGGTCCGTGGGCTCAGTTCGGGTGCCGACGACTATTTGACGAAGCCGTTTGTCTTTGACGA
ACTGCTGGCCCGGCTCCAAGCCTTGGTGCGCCGAGCCCCGTTAAAAGGGGCCTGGTCGGCCCGACTCGAAGCGGGGCCAT
TGGTATTGGATACCCTACGCGGGCAAGTATGGTATCGGGAGACGCCGGTGAACTTAACGGCTCGCCAACTGGCCTTGCTG
GAATTTTTTCTGCGTCACCGCGGCCAGATTGTGACGCGCGACATGTTGCTCGATCGGGTGTGGGACAGTGATTTTGAGCC
GATGGCGAATGTGGTGGATGCCCAAATTGCGCGGCTTCGGGCCAAATTGGACCCTCTGACGGGGCGGAAGGAGTCCATTA
TCCAAACGGTCCGCGGACGGGGCTATCGTTTGACGCTATGA

Protein sequence : 
MKVLLVEDDQRIATLLQKGLTKNGHVAETALTAREAYRRLADGVFDVMVLDVKLPDDDGFAVLERVRRDGLEIPVLMLTA
RDSVDDKVRGLSSGADDYLTKPFVFDELLARLQALVRRAPLKGAWSARLEAGPLVLDTLRGQVWYRETPVNLTARQLALL
EFFLRHRGQIVTRDMLLDRVWDSDFEPMANVVDAQIARLRAKLDPLTGRKESIIQTVRGRGYRLTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 3e-24 41
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TPY_1498 YP_004719425.1 winged helix family two component transcriptional regulator BAC0125 Protein 4e-33 43
TPY_1498 YP_004719425.1 winged helix family two component transcriptional regulator BAC0197 Protein 2e-29 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TPY_1498 YP_004719425.1 winged helix family two component transcriptional regulator VFG0473 Protein 7e-27 41
TPY_1498 YP_004719425.1 winged helix family two component transcriptional regulator VFG0596 Protein 2e-28 41