Gene Information

Name : kdsB (CTL2C_55)
Accession : YP_004717316.1
Strain : Chlamydia trachomatis L2c
Genome accession: NC_015744
Putative virulence/resistance : Virulence
Product : 3-deoxy-D-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1212
EC number : 2.7.7.38
Position : 521834 - 522598 bp
Length : 765 bp
Strand : +
Note : [M] COG1861 Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase homolog

DNA sequence :
ATGTTTGCGTTTTTAACCAGCAAAAAAGTCGGCATTCTCCCCTCTAGATGGGGAAGCTCCCGCTTCCCTGGAAAACCTCT
AGCAAAAATTCTAGGGAAAACCCTTGTTCAAAGATCCTATGAAAATGCCTTAAGCAGTCAATCTCTAGATTGTGTTGTTG
TGGCAACAGATGATCAACGAATTTTTGACCATGTTGTTGAATTTGGGGGGCTCTGTGTCATGACTAGCACATCTTGCGCT
AACGGAACTGAGCGAGTAGAAGAGGTTGTGTCTCGACATTTTCCTCAAGCAGAGATTGTTGTGAACATCCAAGGAGACGA
GCCCTGTTTATCTCCTACCGTCATAGATGGGCTTGTGAGCACGCTAGAGAACAATCCTGCTGCAGATATGGTCACACCTG
TTACAGAAACAACAGACCCCGAAGCGATATTGACAGATCACAAAGTGAAGTGTGTTTTCGATAAGAATGGCAAAGCTCTT
TACTTTAGCAGAAGCGCTATTCCTCACAACTTTAAACATCCAACACCTATTTATCTGCATATTGGTGTTTATGCTTTTAG
AAAAGCTTTTCTAAGTGAATATGTTAAAATTCCTCCTTCCTCGTTAAGCCTAGCCGAAGATCTTGAACAATTACGAGTAT
TAGAAACAGGTCGTTCTATCTACGTTCATGTTGTTCAGAATGCAACGGGCCCTTCTGTTGATTATCCCGAAGATATAACC
AAAGTGGAGCAGTATTTATTATGTCTTTCAAAAGCATCTTTTTGA

Protein sequence :
MFAFLTSKKVGILPSRWGSSRFPGKPLAKILGKTLVQRSYENALSSQSLDCVVVATDDQRIFDHVVEFGGLCVMTSTSCA
NGTERVEEVVSRHFPQAEIVVNIQGDEPCLSPTVIDGLVSTLENNPAADMVTPVTETTDPEAILTDHKVKCVFDKNGKAL
YFSRSAIPHNFKHPTPIYLHIGVYAFRKAFLSEYVKIPPSSLSLAEDLEQLRVLETGRSIYVHVVQNATGPSVDYPEDIT
KVEQYLLCLSKASF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 2e-33 42
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 1e-33 42
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 2e-33 41