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Name : CTL2C_683 (CTL2C_683) Accession : YP_004717220.1 Strain : Chlamydia trachomatis L2c Genome accession: NC_015744 Putative virulence/resistance : Virulence Product : regulatory protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4789 EC number : - Position : 425376 - 427388 bp Length : 2013 bp Strand : - Note : [NU] COG1298 Flagellar biosynthesis pathway, component FlhA DNA sequence : ATGATCATTTTGCCATTGCCTCCAGCTATGGTGGACTTTATGATCACCATTAACTTGGCGATCTCTGTGTTCCTGCTGAT GGTTGCCTTGTATATTCCCAGCGCATTACAACTTTCTGTTTTCCCCTCCTTACTCTTAATCACCACAATGTTCCGATTGG GGATTAACATTTCTTCCTCCCGACAAATTCTCCTTCATGCTTATGCTGGTCACGTGATCCAAGCCTTCGGAGACTTCGTC GTTGGAGGAAACTATGTCGTTGGATTTATTATCTTCCTAATCATCACCATCATTCAGTTTATCGTGGTAACAAAAGGTGC GGAGAGGGTCGCTGAGGTAGCTGCTCGATTCCGATTAGATGCCATGCCTGGTAAACAGATGGCCATCGATGCCGACCTAC GAGCAGGAATGATTGATGCGACACAAGCTCGTGATAAGCGATCTCAGATTCAGAAAGAAAGTGAACTTTATGGAGCTATG GACGGAGCCATGAAGTTCATTAAGGGAGACGTGATCGCAGGGATTGTTATCTCCTTGATTAACATCGTAGGAGGATTAGT CATCGGAGTGACCATGAAGGGCATGACGATGGCTCAAGCCGCGCACATCTACACGTTGATTACGATCGGTGATGGGTTAG TTTCTCAAATCCCCTCTCTGTTAATCTCTTTAACAGCTGGTATCGTAACCACTCGAGTATCTAGTGATAAAGACACTAAC CTTGGTAAGGAAATTTCTAGCCAGTTGGTTAAAGAACCTCGGGCACTTCTCCTATCCGCAGGCGCAACCTTAGGAATCGG ATTCTTCAAAGGTTTCCCTTTATGGTCATTTGCTTTAATGGCCGTTCTCTTTGCAGTATTAGGTATTCTGTTAATCACTA AGAAAAACTCTCCAGGGAAAAAAGGCGGAGCCAGCTCTACTACTACAGTAGGTGCCGCTGATGGAGCTGCGGCTTCAGGA GAAAATTCTGATGATTATGCTCTGACTCTTCCTGTAATTCTTGAACTTGGAAAAGATCTTTCTAAACTCATCCAACAACG AACCAAATCGGGGCAAAGTTTTGTGGATGATATGATTCCTAAAATGCGTCAGGCTCTCTATCAGGATATTGGAATTCGTT ATCCAGGAATCCATGTACGTACAGACTCCCCTTCCTTGGAAGGTAATGACTATATGATTCTGCTGAATGAGGTTCCCTAC GTTCGCGGAAAAATTCCACCAAATCATGTGTTAACAAATGAAGTAGAAGAAAACTTATCTCGGTATAACTTACCTTTTAT TACTTACAAAAATGCTGCAGGATTGCCTTCCACTTGGGTTAGTACAGATGCTCTCACTATCTTAGAGAAAGCTGCGATTA AATACTGGTCTCCTTTGGAAGTGATTATTCTTCACTTGTCCTACTTCTTCCATAGAAATTCTCAAGAGTTCTTAGGCATT CAGGAAGTACGCTCTATGATTGAATTTATGGAACGTTCCTTCCCTGATCTTGTTAAAGAGGTTACCCGTCTTATTCCTCT ACAGAAGCTTACAGAAATCTTTAAGCGTTTAGTTCAAGAACAAATATCCATTAAGGATTTACGAACTATTTTGGAATCTT TGAGCGAATGGGCACAGACGGAAAAAGATACAGTATTACTTACTGAATATGTGCGCTCTTCCTTGAAACTCTATATCAGC TTCAAGTTCTCTCAAGGGCAATCCGCTATTTCTGTATATCTGCTCGATCCTGAAATTGAAGAGATGATCCGCGGAGCAAT CAAACAAACTTCTGCAGGATCTTATTTGGCTTTAGATCCAGATTCTGTAAACCTCATCTTAAAATCTATGCGGATGACTA TTACTCCTACACCTCCTGGAGGACAGCCTCCTGTGCTGTTGACAGCAATTGATGTCAGACGCTATGTACGGAAATTGATA GAGACAGAATTCCCTGATATCGCTGTGATTTCTTACCAAGAAGTTTTACCTGAAATTAGAATCCAGCCTTTGGGAAGAAT TCAAATTTTCTAA Protein sequence : MIILPLPPAMVDFMITINLAISVFLLMVALYIPSALQLSVFPSLLLITTMFRLGINISSSRQILLHAYAGHVIQAFGDFV VGGNYVVGFIIFLIITIIQFIVVTKGAERVAEVAARFRLDAMPGKQMAIDADLRAGMIDATQARDKRSQIQKESELYGAM DGAMKFIKGDVIAGIVISLINIVGGLVIGVTMKGMTMAQAAHIYTLITIGDGLVSQIPSLLISLTAGIVTTRVSSDKDTN LGKEISSQLVKEPRALLLSAGATLGIGFFKGFPLWSFALMAVLFAVLGILLITKKNSPGKKGGASSTTTVGAADGAAASG ENSDDYALTLPVILELGKDLSKLIQQRTKSGQSFVDDMIPKMRQALYQDIGIRYPGIHVRTDSPSLEGNDYMILLNEVPY VRGKIPPNHVLTNEVEENLSRYNLPFITYKNAAGLPSTWVSTDALTILEKAAIKYWSPLEVIILHLSYFFHRNSQEFLGI QEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFKRLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYIS FKFSQGQSAISVYLLDPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMRMTITPTPPGGQPPVLLTAIDVRRYVRKLI ETEFPDIAVISYQEVLPEIRIQPLGRIQIF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lssD | AAO18050.1 | LssD | Virulence | TTSS locus | Protein | 2e-136 | 46 |
| YPO0266 | YP_002345347.1 | secretion system apparatus protein SsaV | Virulence | Not named | Protein | 2e-93 | 42 |
| escV | AFO66414.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 6e-96 | 41 |
| escV | AFO66296.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 5e-96 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CTL2C_683 | YP_004717220.1 | regulatory protein | VFG2126 | Protein | 0.0 | 100 |
| CTL2C_683 | YP_004717220.1 | regulatory protein | VFG0064 | Protein | 2e-140 | 47 |
| CTL2C_683 | YP_004717220.1 | regulatory protein | VFG0384 | Protein | 3e-136 | 46 |
| CTL2C_683 | YP_004717220.1 | regulatory protein | VFG0198 | Protein | 6e-130 | 46 |
| CTL2C_683 | YP_004717220.1 | regulatory protein | VFG1006 | Protein | 1e-92 | 41 |
