Gene Information

Name : pilD (PSTAB_0959)
Accession : YP_004713329.1
Strain : Pseudomonas stutzeri ATCC 17588
Genome accession: NC_015740
Putative virulence/resistance : Virulence
Product : type 4 prepilin peptidase PilD
Function : -
COG functional category : N : Cell motility
COG ID : COG1989
EC number : -
Position : 1027011 - 1027880 bp
Length : 870 bp
Strand : +
Note : -

DNA sequence : 
ATGGGGCTGCTCGATTATTTGGCCAGCCACGTGCTGGCCTTTGTTTTGTCTGCTGCAGTGCTCGGTCTGCTGGTTGGCAG
CTTTCTCAATGTCGTGATTTACCGTTTGCCAATAATGATGCAGCGCGAATGGCGCATGCAGGCGCGGGAATATTTGGAGT
ATCCGCCCGAGCCAATTGGGGAGCGTTTCAATCTACTGGTGCCGAGTTCACGCTGCCCTCACTGCGGTCATCGTATCCGT
GCCTGGGAGAACATTCCCTTGGTCAGCTGGCTGGCGCTGCGTGGAAAGTGCTCGTCTTGTCAGGCGCCGATCAGCTGTCG
ATATCCGTTGGTTGAGCTGGCGTGTGGCGTGCTATCCGGATACGTGGCATGGCATTTCGGTTTTTCCTGGCAGGCAGGGG
CGATGCTTCTGCTGACCTGGGGGGTGCTGGCGATGAGCATGATCGATGTCGATCATCAGTTGCTGCCTGACTCGCTCGTG
CTGCCGCTCTTGTGGTTAGGGTTGATTGCCAACAACTTTACTCTGTTCGCCTCTCTCGAGGATGCGCTGTGGGGGGCGAT
AGCCGGTTACCTGAGCCTATGGTCCGTTTATTGGCTGTTCAAGCTGGTCACAGGCAAAGAGGGTATGGGCTACGGCGATT
TCAAGCTGCTGGCGATGCTTGGTGCCTGGGGCGGCTGGCAGGTTCTGCCGCTCACTATCTTGCTGTCTTCGGTGGTCGGC
GCCGTGCTTGGCAGTATTTTGCTGAGGGTGCAGCGGGCTGAAAGCAGTACGCCCATTCCGTTCGGGCCGTATCTGGCGAT
AGCGGGGTGGATTGCGTTGCTTTGGGGCGACCGAATTACCGAAAGCTACCTCCAGTTCGCTCGCTTCTAA

Protein sequence : 
MGLLDYLASHVLAFVLSAAVLGLLVGSFLNVVIYRLPIMMQREWRMQAREYLEYPPEPIGERFNLLVPSSRCPHCGHRIR
AWENIPLVSWLALRGKCSSCQAPISCRYPLVELACGVLSGYVAWHFGFSWQAGAMLLLTWGVLAMSMIDVDHQLLPDSLV
LPLLWLGLIANNFTLFASLEDALWGAIAGYLSLWSVYWLFKLVTGKEGMGYGDFKLLAMLGAWGGWQVLPLTILLSSVVG
AVLGSILLRVQRAESSTPIPFGPYLAIAGWIALLWGDRITESYLQFARF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAE85237.1 putative prepilin peptidase A Not tested PAI V 536 Protein 3e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pilD YP_004713329.1 type 4 prepilin peptidase PilD VFG0114 Protein 5e-88 78
pilD YP_004713329.1 type 4 prepilin peptidase PilD VFG0234 Protein 3e-44 53
pilD YP_004713329.1 type 4 prepilin peptidase PilD VFG1882 Protein 1e-49 51
pilD YP_004713329.1 type 4 prepilin peptidase PilD VFG2428 Protein 8e-36 51