Gene Information

Name : PSTAB_0903 (PSTAB_0903)
Accession : YP_004713273.1
Strain : Pseudomonas stutzeri ATCC 17588
Genome accession: NC_015740
Putative virulence/resistance : Virulence
Product : putative outer membrane receptor
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4771
EC number : -
Position : 970501 - 972807 bp
Length : 2307 bp
Strand : -
Note : -

DNA sequence :
ATGTCTACCCCCTTCGCACGTACTGCCCTGTCCTGCGCCATGATCGGCTGCAGCTGGACGGCCCTGGCCCAGAACGCGCC
TGTCACGCTCAACGACACGGTCGTCAGTGCCGCAGGCTTCGAACAGAAGATCACCGAAGCACCGGCGAGCATCAGCGTCA
TCAGCCGTGAAGATCTGCAGCAAAAGCGCTACAACAACCTGGCGCAGGCTCTGGGCGACGTGGAAGGCATCGACATCGGC
CAGGGCACGGGCAAGACCGGCGGATTGAATATCAGCATCCGCGGCATGCCGAGCCAGTACACCCTGATCCTTATCGACGG
GCGCCGTCAGAACGCGGCGGGCAATGTCACGCCCAACGGCTTCAACGAAACGTCCACCAGCTTCATGCCGCCACTCTCTG
CCATCGAACGTATCGAAGTCATCCGCGGCCCGATGTCGACGCTTTATGGTTCTGACGCCATGGGCGGCGTGATCAACATC
ATTACCCGCAAGGTGGCCAAGGAATGGACCGGATCGCTGACGCAGGACTACACCTACCAGGAAGACCGCGACTTCGGCGA
TACCCGCAACACCAGCATCTACGCCAGTGGCCCGCTGGTCGATGGCTTGCTGGGCCTGCAGCTGCGCGGAAGCCTGTTCG
ATCGTGAAGCGTCCGATCTGGAGATTGCTCCTGGCGTACCCATGAGCCGCCGTGGTGGCTCTGCGGTCGAGGGCGGCAAT
CACACCATAGGTGGCCGTCTGACCCTGACGCCCAACGATAGCCACGACATCTCATTGGACGTTGAGCGTGGCCGGCAACG
TTACGAGAATGACGACTGCCAGCTCGGAACTCTTGATGGCCAGGGCAGCGGCGCTGCGGATACGGGGTGCAGCGTCAACC
AGCCAACACAGGCCAATGGCTACGCCGACAAGCTGCGTTTCGAGCGTGATCAGTACGCACTGACTCACACAGGCCGCTTT
GGCTTCGGCACAGTCGACAGCAGTCTGATGCGAAACACCACTGAAACCATTGGCCGCACCATTCCCGGCGGCACCTTCGG
CCGTCCCGGTTTCCTCCCAATCGGCGCCCCGTACCCCAACTTCCCCTCTATCATCGTCGGCGACGACCGCGAGCTCAAAA
CAACGAATACTGTTTTGGACAGCAAACTCACCACTCCGATTGGAGACGCCAACATCGCTACGGTAGGGCTCCAGTGGTGG
AAAGCGGAGATGACCGACAGCCTCGCTGGGGAGGATTTCGAGCAAACGACCAAAGCAGTCTTTGCAGAAAATGAGTGGCG
TATTCGCAACGATCTGGCACTGACCGTCGGCGGCCGATATGACGACCATGAAACCTTCGGTGGCCATTTCAGCCCCCGCG
CGTATCTAGTGTGGAATACCACCGATCACTGGACGCTCAAAGGTGGCGTCAGCCGTGGTTACAAAGCGCCAGACCTAAAT
GATCTGCACGATGGCATCAATGGAGTTACCGGGCAGGGCTCGACCACGACCATCGGTAATCCCGACCTGAAACCGGAAAC
CAGTACGACGACCGAACTCGGCGCTTACTACGACAGCCTTACGGGCTTTAGCGCGAACGCCACGCTGTTCCATAACAAAT
TTAAGGACAAGATCGCCTCTGGTGACCCGGTAGCAAATCCTCTGTGCGCCAGCAACCCCGGCTCCGGCAGCACCCCACCG
GGAACCTGCCCACGCAACATCAACATCGACGATGCGACCACCAAGGGCATCGAGCTGGCTGCCAGCTGGAACTTCGCTCC
CGCCTGGACGTTGAGCGGCAATTACACCTACACCGATAGCGAGCAAAAGAGTGGCAGTAACAAAGGCGAACCGCTAACCA
ACACGCCTGAACACCTGGCCAACGTTAAACTCGACTGGCAGACCTCTGAGCGCCTGGGCCTGTGGTTGAAGAGCGAGTAT
CGCGGGGAGCGTGCGCGCTTTACCTCCAGCTATGCCAACCTCGCGAATGCCGATGGCACCTACTCCACCAGCCAGTCGAT
CTACGACACGCTGGGCAAGAACACTAAGGCGTATACCCTGTTCCATCTTGGCGGGTCGTATCGAGCTGCCGAGAACCTGA
CTATCAACGCGACGATTTACAACCTGTTCGACAAAGACTTTGTCGACGGTAGTGCCTACACCACCTATTCAACTCCCCGT
TATAACAGCGCAGGTGTTATTACTGCGCCGGGCGGAGTACCTGGCGACCCCGCTTACGGCACCGACTACAGCCACTTCGG
TGCCGCCACTACTGGAATCGTGGAAGAAGGCCGCCGTCTGTGGCTGTCCGCCAACTTCACCTTCTGA

Protein sequence :
MSTPFARTALSCAMIGCSWTALAQNAPVTLNDTVVSAAGFEQKITEAPASISVISREDLQQKRYNNLAQALGDVEGIDIG
QGTGKTGGLNISIRGMPSQYTLILIDGRRQNAAGNVTPNGFNETSTSFMPPLSAIERIEVIRGPMSTLYGSDAMGGVINI
ITRKVAKEWTGSLTQDYTYQEDRDFGDTRNTSIYASGPLVDGLLGLQLRGSLFDREASDLEIAPGVPMSRRGGSAVEGGN
HTIGGRLTLTPNDSHDISLDVERGRQRYENDDCQLGTLDGQGSGAADTGCSVNQPTQANGYADKLRFERDQYALTHTGRF
GFGTVDSSLMRNTTETIGRTIPGGTFGRPGFLPIGAPYPNFPSIIVGDDRELKTTNTVLDSKLTTPIGDANIATVGLQWW
KAEMTDSLAGEDFEQTTKAVFAENEWRIRNDLALTVGGRYDDHETFGGHFSPRAYLVWNTTDHWTLKGGVSRGYKAPDLN
DLHDGINGVTGQGSTTTIGNPDLKPETSTTTELGAYYDSLTGFSANATLFHNKFKDKIASGDPVANPLCASNPGSGSTPP
GTCPRNINIDDATTKGIELAASWNFAPAWTLSGNYTYTDSEQKSGSNKGEPLTNTPEHLANVKLDWQTSERLGLWLKSEY
RGERARFTSSYANLANADGTYSTSQSIYDTLGKNTKAYTLFHLGGSYRAAENLTINATIYNLFDKDFVDGSAYTTYSTPR
YNSAGVITAPGGVPGDPAYGTDYSHFGAATTGIVEEGRRLWLSANFTF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
r4 AAC61730.1 exogenous ferric siderophore receptor R4 Not tested PAI I CFT073 Protein 1e-127 43
unnamed CAC39288.1 hypothetical protein Not tested LPA Protein 1e-128 42
iha AAF36432.2 adhesin Virulence TAI Protein 8e-129 42
c3610 NP_755485.1 bifunctional enterobactin receptor/adhesin protein Not tested PAI I CFT073 Protein 1e-128 42
ECUMN_3356 YP_002414032.1 bifunctional enterobactin receptor/adhesin protein Virulence Not named Protein 1e-128 42
Z1178 NP_286713.1 bifunctional enterobactin receptor/adhesin protein Virulence TAI Protein 1e-128 42
Z1617 NP_287121.1 bifunctional enterobactin receptor/adhesin protein Not tested TAI Protein 1e-128 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSTAB_0903 YP_004713273.1 putative outer membrane receptor VFG1731 Protein 6e-129 42