Gene Information

Name : colR (PSTAB_0807)
Accession : YP_004713177.1
Strain : Pseudomonas stutzeri ATCC 17588
Genome accession: NC_015740
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator ColR
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 870640 - 871323 bp
Length : 684 bp
Strand : +
Note : -

DNA sequence : 
ATGCGCATCCTGGTCATTGAAGACAACCGTGACATCCTGGCCAACGTGCTCGACTACCTCGAGCTCAAGGGCTACCTGGT
GGACTGTGCGCAGGACGGGCTGAGTGGCCTGCATCTGGCCGCGACCCAGGAATACGACCTCATCGTGCTGGACATCATGC
TGCCCGGCATCGATGGCTATCAGGTGTGCAAGCGCCTGCGCGAAGACGCACGGCGCGACACGCCGATCATCATGCTCACC
GCGCGCGACGCCCTGCCGGATCGCATCAAGGGATTGGAAGCCGGCGCCGACGACTATCTGATCAAGCCCTTCGCGCTGTC
CGAACTGGTCGCCCGTATCGAGGCGGTGTTGCGTCGCAGCCAGGGTTCGCGGCGTCGCCAGCTGCAGGTCGGTGACCTGG
TCTATGACCTCGATACCCTGGCCGTCAGCCGCGGCGGCGTGCCGATACGGCTCAACCCCATCGGCCACAAGCTGCTGGCC
ATCCTCATGCAGCGCAGCCCGGCGGTGGTGCGCCGCGAGGCGCTGGAGGAGGCGCTGTGGGGCGACAACGTACCGGACAG
CGACAGCCTGCGCAGCCACATCCACCAGCTGCGCCAGGCACTGGACAAGCCCTTCGACCGGCCGCTGCTGCACACCGTGC
ACGGTGTGGGCTTCCGTCTGGCGGAGGATGGCGATGCTCACTAA

Protein sequence : 
MRILVIEDNRDILANVLDYLELKGYLVDCAQDGLSGLHLAATQEYDLIVLDIMLPGIDGYQVCKRLREDARRDTPIIMLT
ARDALPDRIKGLEAGADDYLIKPFALSELVARIEAVLRRSQGSRRRQLQVGDLVYDLDTLAVSRGGVPIRLNPIGHKLLA
ILMQRSPAVVRREALEEALWGDNVPDSDSLRSHIHQLRQALDKPFDRPLLHTVHGVGFRLAEDGDAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 8e-36 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-35 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
colR YP_004713177.1 DNA-binding response regulator ColR BAC0125 Protein 6e-34 42
colR YP_004713177.1 DNA-binding response regulator ColR BAC0197 Protein 1e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
colR YP_004713177.1 DNA-binding response regulator ColR VFG0596 Protein 3e-36 43
colR YP_004713177.1 DNA-binding response regulator ColR VFG1389 Protein 5e-22 41