Gene Information

Name : PSTAB_4078 (PSTAB_4078)
Accession : YP_004716448.1
Strain : Pseudomonas stutzeri ATCC 17588
Genome accession: NC_015740
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3517
EC number : -
Position : 4402732 - 4404210 bp
Length : 1479 bp
Strand : +
Note : -

DNA sequence :
ATGACCACTAGCGCAGCCGCCGTCGAGCACGGCAATCACCTCGCCGAAGGCGGCATTCTCGACCGCATCATCGCCGAAAC
CCGCCTGACCCCGGACGACGAGGCCTACGACATCGCCAAGCGCGGCGTATCGGCCTTCATCGAGGAACTGCTCAAGCCGC
AGAACGAAAACGAGCCGGTGAAGAAGGCAATGGTCGACCGCATGATCGCGGAGATCGACGCCAAGCTCAGCCGGCAGATG
GACGAAATCCTTCACCACCCACAGTTCCAGGCGCTGGAGTCCTCCTGGCGTGGCCTGAAGCTGCTGGTGGATCGCACGAA
CTTTCGCGAAAACATCAAGCTCGAACTGCTCAACGCCTCCAAGCAAGACCTGCTGGACGACTTCGAGGACAGCCCTGAAA
TCGTCCAGTCCGGCCTGTACAAGCACATCTACACGGCCGAGTACGGCCAGTTCGGTGGCCAGCCGGTCGGTGCGCTGATC
GCCAACTACTTCTTCGATCCCAGCGCGCCCGACGTCAAGACCATGCAGTACGTCGCCAGCGTCGCGAGCATGTCCCATGC
GCCGTTCATCGCCGCTGCCGGCCCGAAATTCTTCGGCCTGGAAAGCTTCACCGGCCTGCCGGACCTTAAGGACCTCAAGG
ATCACTTCGAGGGCCCGCAGTTCACCAAATGGCAGAGCTTCCGCGAACAAGAAGATGCCCGCTATGTCGGCCTGACCGTC
CCGCGGTTCCTACTGCGCAATCCGTACGATCCGGAAGACAACCCGGTGAAGAGCTTCGTCTACAAGGAAAACGTCGCCGG
CAGCCACGAGCACTACCTGTGGGGCAACACCGCCTACGCCTTCGCCAGCCGGCTGACCGACAGCTTCGCCAAGTTCCGCT
GGTGCCCGAACATCATCGGGCCGCAGAGCGGCGGCGCAGTGGAAGACCTGCCGCTGCACCATTTCGAAAGCATGGGCGAG
ATCGAGACCAAGATCCCGACCGAGGTGCTGGTTTCCGACCGTCGCGAGTACGAGCTGGCCGAGGAAGGCTTTATCGCCCT
GACCATGCGCAAGGGCAGCGACAACGCCGCCTTCTTCTCCGCCAACTCGGCGCAGAAGCCGAAGTTCTTCGGCAACAGTG
AGGAAGGCAAGACCGCCGAACTGAACTACAAGCTCGGCACCCAGCTGCCCTACCTGTTCATCGTCAACCGCCTGGCGCAC
TACCTGAAGGTGCTGCAGCGCGAGCAGATCGGTGCATGGAAGGAGCGCACCGACCTCGAACTGGAACTGAACAAGTGGAT
CCGCCAGTTCGTCGCCGACCAGGAGAATCCGAGCTCCGAAGTACGCAGCCGTCGTCCGCTGCGCGCCGCCCAAGTCAACG
TCAGCGACGTCGAGGGCGAACCGGGCTGGTATCGCGTCAGCCTCAGCGTGCGTCCGCACTTCAAGTACATGGGCGCGGAT
TTCACCCTGTCGCTGGTTGGCAAGCTGGACAAGGAATAA

Protein sequence :
MTTSAAAVEHGNHLAEGGILDRIIAETRLTPDDEAYDIAKRGVSAFIEELLKPQNENEPVKKAMVDRMIAEIDAKLSRQM
DEILHHPQFQALESSWRGLKLLVDRTNFRENIKLELLNASKQDLLDDFEDSPEIVQSGLYKHIYTAEYGQFGGQPVGALI
ANYFFDPSAPDVKTMQYVASVASMSHAPFIAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFTKWQSFREQEDARYVGLTV
PRFLLRNPYDPEDNPVKSFVYKENVAGSHEHYLWGNTAYAFASRLTDSFAKFRWCPNIIGPQSGGAVEDLPLHHFESMGE
IETKIPTEVLVSDRREYELAEEGFIALTMRKGSDNAAFFSANSAQKPKFFGNSEEGKTAELNYKLGTQLPYLFIVNRLAH
YLKVLQREQIGAWKERTDLELELNKWIRQFVADQENPSSEVRSRRPLRAAQVNVSDVEGEPGWYRVSLSVRPHFKYMGAD
FTLSLVGKLDKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 9e-162 63
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 7e-162 63
HH0247 NP_859778.1 hypothetical protein Not tested HHGI1 Protein 1e-154 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSTAB_4078 YP_004716448.1 hypothetical protein VFG2093 Protein 7e-180 70
PSTAB_4078 YP_004716448.1 hypothetical protein VFG2475 Protein 6e-169 67
PSTAB_4078 YP_004716448.1 hypothetical protein VFG2070 Protein 2e-83 41