Gene Information

Name : PSTAB_0395 (PSTAB_0395)
Accession : YP_004712765.1
Strain : Pseudomonas stutzeri ATCC 17588
Genome accession: NC_015740
Putative virulence/resistance : Virulence
Product : mutant NtrC-like activator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 443104 - 444501 bp
Length : 1398 bp
Strand : +
Note : -

DNA sequence : 
ATGACTGACGCGGTGCAGGAGCGTGTGCTGCTGGTCGAGGACGATGACAGCCTGCGCCAGCTGCTGGTTGAGGAGCTGGA
GGATCGCGGGCTGCAGGTGCGCGCGCTGGCCAGCGCCGAGGAGGCGGTGGGTTCCCTGGAAAGCTGGGAGCCGGCGCTGG
TGGTCAGCGACCTGCGCCTGCCCGGCGCTGACGGCATGGCGCTGCTGCGGCGGGTGAAGAGCATGCAGGCGGCACCGGCC
TTTCTGGTGATCACCGCGTTCGGCAGCATTCAGCAGGCGGTGGCGGCGCTCAAGGAAGGCGCCGACGAATTTCTCACCAA
GCCGCTGGACCTCGAGCACTTCGCTCTGGCGGTCGGCCGCGCGCTGGAGACGCGGCGCCTGCGCGACGAAGTGCGACGCT
TCCAGCAGCTGCTCAGCGATGATCGCTTCCACGGCATGCTCGGACGCAGCCGGGTGATGCGCGGGCTGTTCGATCAGATC
CGCCAGCTCGCCCGTGCCGAAGGGCCGGTACTGGTGATCGGTGAGAGCGGCACCGGCAAGGAACTGGTGGCCAGGGCGGT
GCACGCCGAGAGCGAGCGCGCCGGCGGCCCGTTCCTGGCCATCAACTGCGCCGGGTTGCCGGCCGAGCTCCTGGAAAGCG
AGTTCTTCGGCCATGTCGCCGGTGCCTTCACCGGCGCCAATCGCGCGCACAAGGGGCTGTTCCAACAGGCCGACGGCGGT
ACGCTCTTTCTCGACGAGATCGACGAGATCGGCGAGATGCCGCTGCCGCTGCAGGCCAAGCTCCTGCGCGTGCTGCAGGA
AGGCACGATCCGCCCGGTGGGTGCCGAGCGCGAACTCAGCGTGGACGTGCGCATCATCGCCGCCAGCAATCGCCCGCTGG
AAACCGAGGCCGGGCGCGAGGCGTTCCGCGAAGACCTGTTCTTCCGTCTGGAAACCTTCATCCTGCAGGTGCCGCCGTTG
CGTGATCGGGAGGAGGATCTCGAATTGCTGGCCGCCGGCTTCGTCGCCCACTTCGCCGCGCGCGGCGGGCGGCCGGTGCG
CGGCATCGCGCCGGCGGCGCTGGAGCAGCTACGCCGCTATCCGTTCCCGGGCAACGTGCGCGAGCTGCAGAACGCCATCG
AGCGGGCAGTGACGTTCTGCCACGGGCGCAGCATCGAGCTGGAGCACCTGCCCAGCCGCATCGCCAGCTACCGTGACGAC
AAGGCCCGCAGCGCCGGGGCCGAGCTGCTCGCCGAGCTCAGCGATGGCCCGTTGCTGCCGACCCTGGAAGAGCTGGAACT
GCGTTATATCGAGCACGTGCTCAAGCTGGTGGATGGCAACAAGCGCCGCGCGGCGGCCTTGCTCGGCATCGGACGGCGCA
CGCTGTACAGACGCCTCGGCGAGCGCGAGGAAGGCTGA

Protein sequence : 
MTDAVQERVLLVEDDDSLRQLLVEELEDRGLQVRALASAEEAVGSLESWEPALVVSDLRLPGADGMALLRRVKSMQAAPA
FLVITAFGSIQQAVAALKEGADEFLTKPLDLEHFALAVGRALETRRLRDEVRRFQQLLSDDRFHGMLGRSRVMRGLFDQI
RQLARAEGPVLVIGESGTGKELVARAVHAESERAGGPFLAINCAGLPAELLESEFFGHVAGAFTGANRAHKGLFQQADGG
TLFLDEIDEIGEMPLPLQAKLLRVLQEGTIRPVGAERELSVDVRIIAASNRPLETEAGREAFREDLFFRLETFILQVPPL
RDREEDLELLAAGFVAHFAARGGRPVRGIAPAALEQLRRYPFPGNVRELQNAIERAVTFCHGRSIELEHLPSRIASYRDD
KARSAGAELLAELSDGPLLPTLEELELRYIEHVLKLVDGNKRRAAALLGIGRRTLYRRLGEREEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 1e-57 41
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 1e-57 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSTAB_0395 YP_004712765.1 mutant NtrC-like activator BAC0467 Protein 1e-65 43
PSTAB_0395 YP_004712765.1 mutant NtrC-like activator BAC0089 Protein 2e-71 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSTAB_0395 YP_004712765.1 mutant NtrC-like activator VFG1214 Protein 2e-68 44
PSTAB_0395 YP_004712765.1 mutant NtrC-like activator VFG0116 Protein 2e-58 42
PSTAB_0395 YP_004712765.1 mutant NtrC-like activator VFG1249 Protein 8e-53 41