Gene Information

Name : PSTAB_3776 (PSTAB_3776)
Accession : YP_004716146.1
Strain : Pseudomonas stutzeri ATCC 17588
Genome accession: NC_015740
Putative virulence/resistance : Resistance
Product : multidrug efflux SMR transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2076
EC number : -
Position : 4065244 - 4065576 bp
Length : 333 bp
Strand : +
Note : -

DNA sequence :
ATGTCCGGCTATGTTTACCTGGCCATCGCCATCTGCGCCGAGGTGGTCGCCACCACCTCGATGAAGGCACTGGCCGGCTT
CAATCGTCCGCTACCACTGCTGCTGGTGGTAACGGGCTACAGCCTGTCGTTCTGGATGCTCGCGCTGGTGGTACGGACCA
TCCCGGTAGGCATCGCCTATGCCATCTGGGCCGGGCTCGGCATCGTGCTGGTCAGCGTCGCCGCGGCGGTGCTCTATCGT
CAGTACCTGGACCTGCCGGCGGTACTGGGCATAGGGCTGATCATCGCCGGTGTAGTGGTCATCCAGTTGTTCTCCCGCAG
TGCAGGCCACTAA

Protein sequence :
MSGYVYLAIAICAEVVATTSMKALAGFNRPLPLLLVVTGYSLSFWMLALVVRTIPVGIAYAIWAGLGIVLVSVAAAVLYR
QYLDLPAVLGIGLIIAGVVVIQLFSRSAGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
qacEdelta1 AGK07016.1 QacEdelta1 Not tested SGI1 Protein 1e-13 46
qacE-delta1 AET25389.1 QacE-delta1 Not tested PAGI-2(C) Protein 1e-13 46
qacEdelta1 ABZ01839.1 QacEdelta1 Not tested SGI2 Protein 1e-13 46
qacEdelta1 YP_005797134.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 1e-13 46
qacEdelta1 AGK07074.1 QacEdelta1 Not tested SGI1 Protein 1e-13 46
qacE-delta1 AFG30112.1 QacE-delta1 Not tested PAGI-2 Protein 1e-13 46
qacEdelta1 CAJ77030.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 1e-13 46
qacEdelta1 YP_005797150.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 1e-13 46
qacEdelta1 AGK07100.1 QacEdelta1 Not tested SGI1 Protein 1e-13 46
qacEdelta1 AGF34989.1 QacEdelta1 Not tested SGI1 Protein 1e-13 46
qacEdelta1 CAJ77049.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 1e-13 46
ebr YP_006098377.1 putative ethidium bromide resistance protein Not tested Tn2411 Protein 1e-13 46
qacEdelta1 AGK07109.1 QacEdelta1 Not tested SGI1 Protein 1e-13 46
qacEdelta1 AGF35028.1 QacEdelta1 Not tested SGI1 Protein 1e-13 46
qacEdelta1 CAJ77052.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 1e-13 46
qacEdelta1 ACN81026.1 QacEdelta1 Not tested AbaR5 Protein 1e-13 46
qacEdelta1 AFV53123.1 QacEdelta1 multidrug exporter Not tested AbGRI2-1 Protein 1e-13 46
qacEdelta1 AGF35063.1 QacEdelta1 Not tested SGI1 Protein 1e-13 46
qacEdelta1 CAJ77088.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 1e-13 46
qacEdelta1 AGK36647.1 QacEdelta1 Not tested AbaR26 Protein 1e-13 46
qacEdelta1 AGK06933.1 QacEdelta1 Not tested SGI1 Protein 1e-13 46
qacE-deltal ACF06159.1 quartenary ammonium compound resistance protein Not tested Tn5036-like Protein 1e-13 46
qacEdelta1 AAK02047.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 1e-13 46
qacEdelta1 AGK06970.1 QacEdelta1 Not tested SGI1 Protein 1e-13 46
qacE-delta1 ACY75523.1 QacE-delta1 Not tested Tn6060 Protein 1e-13 46
qacEdelta1 AAK02056.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 1e-13 46
qacEdelta1 AGK06979.1 QacEdelta1 Not tested SGI1 Protein 1e-13 46
qacE-delta1 ACY75532.1 QacE-delta1 Not tested Tn6060 Protein 1e-13 46
qacEdelta1 ABB48428.1 QacEdelta1 Not tested SGI1 Protein 1e-13 46
ACICU_00227 YP_001844886.1 membrane transporter Not tested AbaR20 Protein 1e-13 46
unnamed CAD42067.1 hypothetical protein Not tested PAI II 536 Protein 4e-11 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSTAB_3776 YP_004716146.1 multidrug efflux SMR transporter CP004022.1.gene1549. Protein 1e-19 60
PSTAB_3776 YP_004716146.1 multidrug efflux SMR transporter BAC0377 Protein 2e-20 60
PSTAB_3776 YP_004716146.1 multidrug efflux SMR transporter NC_002695.1.913273.p Protein 3e-13 53
PSTAB_3776 YP_004716146.1 multidrug efflux SMR transporter BAC0150 Protein 3e-13 51
PSTAB_3776 YP_004716146.1 multidrug efflux SMR transporter NC_010410.6003348.p0 Protein 2e-17 50
PSTAB_3776 YP_004716146.1 multidrug efflux SMR transporter BAC0002 Protein 2e-17 50
PSTAB_3776 YP_004716146.1 multidrug efflux SMR transporter BAC0324 Protein 4e-15 50
PSTAB_3776 YP_004716146.1 multidrug efflux SMR transporter CP001138.1.gene1489. Protein 5e-14 49
PSTAB_3776 YP_004716146.1 multidrug efflux SMR transporter BAC0322 Protein 4e-14 46
PSTAB_3776 YP_004716146.1 multidrug efflux SMR transporter BAC0323 Protein 5e-14 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSTAB_3776 YP_004716146.1 multidrug efflux SMR transporter VFG1586 Protein 2e-11 43