Gene Information

Name : thiC (PSTAB_3772)
Accession : YP_004716142.1
Strain : Pseudomonas stutzeri ATCC 17588
Genome accession: NC_015740
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 4060029 - 4061912 bp
Length : 1884 bp
Strand : -
Note : -

DNA sequence :
ATGAGCGTGCAAAGCAACAAGAATCTGAGTGAGTCCGCCCAGGTCGACCAGCAGTCCATTCAACCCTTCCCTCGTTCGCA
AAAGATCTATGTACAGGGTTCGCGCCCGGACATCCGCGTACCCATGCGCGAGATCAGCCTGGACGTGACGCCCACCGACT
TCGGTGGCGAGATCAACGCCCCGGTTACCGTCTACGACACTTCCGGCCCCTACACCGACCCGAACGTCACCATCGACGTG
CGCAAGGGCCTGGCCGACGTGCGCAGTGCCTGGATCGAGGACCGGGGCGACACCGAGAAGCTGCCGGGGCTGACCTCCGA
ATTCGGCCAGCGTCGCCTCAACGATGCCGAACTTTCCGCCATGCGCTTCGCCCATGTGCGCAACCCGCGCCGGGCCAAGG
CCGGGCACAACGTCAGCCAGATGCACTATGCAAAGAAGGGCATCATCACGCCGGAGATGGAGTACGTCGCCATCCGCGAG
AACATGAAGCTCGCCGAGGCGCGTGAAGCCGGTTTGCTGGTCGAGCAGCATGCCGGGCAGAGCTTCGGCGCGGCCATTCC
CAAGGAAATCACCCCCGAATTCGTCCGCTCGGAAGTCGCGCGCGGCCGCGCCATCATCCCGGCGAACATCAACCACACCG
AGCTGGAGCCGATGATCATCGGCCGCAACTTCCTGGTGAAGATCAACGGCAACATCGGCAACTCGGCGCTGGGTTCCTCC
ATCGAGGAAGAAGTGGCCAAGCTGACCTGGGGCATCCGCTGGGGTTCGGACACCGTGATGGACCTGTCCACCGGCAAGCA
CATCCACGAGACGCGCGAGTGGATCATCCGCAACTCGCCGGTGCCGATCGGCACCGTGCCGATCTACCAGGCGCTGGAAA
AGGTCAACGGCGTTGCCGAAGACCTGACCTGGGAGCTGTTCCGCGACACCCTGATCGAGCAGGCCGAGCAGGGCGTGGAC
TACTTCACCATCCACGCCGGCGTGCTGCTGCGCTATGTACCGCTGACCGCCAAGCGCGTCACCGGCATCGTCTCGCGCGG
CGGCTCGATCATGGCCAAGTGGTGCCTGGCGCATCACCAGGAGAATTTCCTCTACACCCACTTCGAGGAAATCTGCGAAA
TCATGAAGGCCTACGACGTCAGCTTCTCGCTGGGCGACGGCCTGCGTCCGGGCTCGATCGCCGACGCCAACGACGCCGCG
CAGTTCGGCGAGCTGGAAACCCTCGGCGAGCTGACCAAGATCGCCTGGAAGCACGACGTGCAGACCATGATCGAAGGCCC
GGGCCATGTGCCGATGCACATGATCAAGGAGAACATGGACAAGCAGCTCGAATGCTGCGACGAGGCGCCGTTCTACACCC
TCGGCCCGCTGACCACCGACATTGCCCCGGGCTACGACCACATCACCTCCGGCATCGGTGCGGCGATGATCGGCTGGTTC
GGCTGCGCCATGCTCTGCTACGTCACGCCGAAGGAGCACCTCGGTCTGCCGAACAAGGATGACGTGAAGACCGGCATCAT
CACCTACAAGATCGCCGCGCACGCTGCTGATCTTGCCAAGGGGCATCCGGGCGCGCAGATCCGCGACAACGCGCTGTCCA
AGGCGCGCTTCGAGTTCCGCTGGGAGGATCAGTTCAACCTCGGCCTCGACCCGGACACCGCGCGTGCCTTCCACGACGAG
ACGCTGCCGAAGGAGTCGGCGAAGGTGGCGCACTTCTGCTCCATGTGCGGGCCGAAGTTCTGCTCGATGAAGATTACCCA
GGAAGTGCGCGAGTATGCTGCCGAGCACGGCCTGACCGACGAGCAGAAGGCCATCGAGGCGGGTTTCGCCGAGCAGTCCT
CGCGCTTCAAGGACGAGGGTTCGGTGATCTACAAGCAGGTGTGA

Protein sequence :
MSVQSNKNLSESAQVDQQSIQPFPRSQKIYVQGSRPDIRVPMREISLDVTPTDFGGEINAPVTVYDTSGPYTDPNVTIDV
RKGLADVRSAWIEDRGDTEKLPGLTSEFGQRRLNDAELSAMRFAHVRNPRRAKAGHNVSQMHYAKKGIITPEMEYVAIRE
NMKLAEAREAGLLVEQHAGQSFGAAIPKEITPEFVRSEVARGRAIIPANINHTELEPMIIGRNFLVKINGNIGNSALGSS
IEEEVAKLTWGIRWGSDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVNGVAEDLTWELFRDTLIEQAEQGVD
YFTIHAGVLLRYVPLTAKRVTGIVSRGGSIMAKWCLAHHQENFLYTHFEEICEIMKAYDVSFSLGDGLRPGSIADANDAA
QFGELETLGELTKIAWKHDVQTMIEGPGHVPMHMIKENMDKQLECCDEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWF
GCAMLCYVTPKEHLGLPNKDDVKTGIITYKIAAHAADLAKGHPGAQIRDNALSKARFEFRWEDQFNLGLDPDTARAFHDE
TLPKESAKVAHFCSMCGPKFCSMKITQEVREYAAEHGLTDEQKAIEAGFAEQSSRFKDEGSVIYKQV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 77
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 77
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 73