Gene Information

Name : ureC (PSTAB_3689)
Accession : YP_004716059.1
Strain : Pseudomonas stutzeri ATCC 17588
Genome accession: NC_015740
Putative virulence/resistance : Virulence
Product : urease subunit alpha
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0804
EC number : -
Position : 3974578 - 3976278 bp
Length : 1701 bp
Strand : +
Note : -

DNA sequence :
ATGAAGATTTCCCGCCAAGCCTATGCCGACATGTTCGGCCCCACCGTCGGCGACAAGGTGCGCCTGGCCGACACCGACCT
GTGGATCGAAGTCGAAAAAGACTTCACCACCTATGGCGAAGAGGTGAAGTTCGGCGGCGGCAAGGTGATCCGCGACGGCA
TGGGCCAGAGCCAGCTGTGCGCCGCCGAGGTGGTCGATACCCTGATCACCAACGCGCTGATCCTCGACCACTGGGGCATC
GTCAAGGCCGACGTGGGTCTCAAGGACGGCCGCATCGCCGCCATCGGCAAGGCCGGCAACCCGGACATTCAGCCCGACGT
GACCATCGCCATCGGCGCCAGCACCGAAGTCATCGCCGGCGAAGGCATGATCCTCACCGCCGGCGGCATCGACTCGCACA
TCCACTTCATCTGCCCGCAGCAGATCGAAGAGGCGCTGATGAGCGGCGTGACCACCATGATCGGTGGCGGCACGGGTCCG
GCCACCGGCACCAACGCCACCACGGTGACGCCCGGCCCCTGGCACATGGCGATGATGCTCAAGGCCGCCGACGCCTTTCC
GATGAACATCGGCTTTACCGGCAAGGGCAACGCCTCGCTGCCCGAGCCGCTGATCGAGCAGGTCAGGGCCGGCGCCATCG
GCCTCAAGCTGCACGAGGACTGGGGCACCACCCCGGCCGCCATCGACAACTGCCTGAACGTCGCCGACCAGTACGACGTG
CAGGTCGCGATCCACACCGACACCCTTAACGAATCGGGCTTCGTTGAGACGACCCTCGGCGCGTTCAAGGGCCGTACCAT
CCACACCTACCATACCGAAGGCGCCGGTGGCGGCCACGCGCCGGACATCATCAAGGCCTGCGGCTTCCCCAACGTGTTGC
CCAGTTCGACCAATCCGACCCGGCCGTTCACCCGCAACACCATCGACGAGCACCTGGACATGCTCATGGTCTGCCACCAC
CTCGACCCGAGCATCGCCGAGGACGTGGCCTTCGCCGAGAGCCGCATCCGCCGCGAGACGATCGCCGCCGAAGACATCCT
CCACGACCTCGGTGCCTTCTCCATGATCAGCTCCGACAGCCAGGCCATGGGCCGCGTCGGCGAGGTGATCACCCGCACCT
GGCAGACCGCCGACAAGATGAAGAAGCAGCGCGGCGCCCTGCCCGGCGACGGCGCGGGCAACGACAACTTCCGCGCCAAA
CGCTACATCGCCAAGTACACCATCAACCCGGCGATCACCCACGGCGTCAGCCACGAGGTGGGCTCGATCGAAGTGGGCAA
GTGGGCCGACCTGGTGCTCTGGCGCCCGGCGTTCTTCGGCGTCAAGCCGACGCTGATCCTCAAGGGCGGCGCCATTGCCG
CGAGCCTGATGGGCGACGCCAACGCCTCGATCCCGACGCCGCAGCCGGTGCACTACCGGCCGATGTTCGCCAGTTACGGC
GGTTCGCTGCACGCGTCGAGCTTCACCTTCATCAGCCAGGCCGCCTTCGAAGCCGGCGTGCCGGAACAGCTGGGGCTGAA
GAAGAAAATCGGCGTGGTCCGGGGTTGCCGCCAGGTGCAGAAAAAGGACCTGATCCACAACGACTACACGCCGGACATCC
AGGTCGACCCGCAGAACTATCAGGTGCGCGCCGATGGTCAGCTGCTCTGGTGCGAGCCGGCCGAAGTGCTGCCGATGGCG
CAGCGCTACTTTCTGTTCTGA

Protein sequence :
MKISRQAYADMFGPTVGDKVRLADTDLWIEVEKDFTTYGEEVKFGGGKVIRDGMGQSQLCAAEVVDTLITNALILDHWGI
VKADVGLKDGRIAAIGKAGNPDIQPDVTIAIGASTEVIAGEGMILTAGGIDSHIHFICPQQIEEALMSGVTTMIGGGTGP
ATGTNATTVTPGPWHMAMMLKAADAFPMNIGFTGKGNASLPEPLIEQVRAGAIGLKLHEDWGTTPAAIDNCLNVADQYDV
QVAIHTDTLNESGFVETTLGAFKGRTIHTYHTEGAGGGHAPDIIKACGFPNVLPSSTNPTRPFTRNTIDEHLDMLMVCHH
LDPSIAEDVAFAESRIRRETIAAEDILHDLGAFSMISSDSQAMGRVGEVITRTWQTADKMKKQRGALPGDGAGNDNFRAK
RYIAKYTINPAITHGVSHEVGSIEVGKWADLVLWRPAFFGVKPTLILKGGAIAASLMGDANASIPTPQPVHYRPMFASYG
GSLHASSFTFISQAAFEAGVPEQLGLKKKIGVVRGCRQVQKKDLIHNDYTPDIQVDPQNYQVRADGQLLWCEPAEVLPMA
QRYFLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ureC NP_286680.1 urease subunit alpha Virulence TAI Protein 0.0 74
ureC NP_287088.1 urease subunit alpha Not tested TAI Protein 0.0 74
ureC YP_005684266.1 Urease alpha subunit Not tested PiCp 7 Protein 9e-164 63
ureC YP_005682174.1 Urease alpha subunit Not tested PiCp 7 Protein 1e-163 63
ureC YP_003784325.1 urease subunit alpha Not tested PiCp 7 Protein 1e-163 63
ureC YP_005686358.1 Urease alpha subunit Not tested PiCp 7 Protein 1e-163 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ureC YP_004716059.1 urease subunit alpha VFG0270 Protein 2e-157 64