Gene Information

Name : pilR (PSTAB_3612)
Accession : YP_004715982.1
Strain : Pseudomonas stutzeri ATCC 17588
Genome accession: NC_015740
Putative virulence/resistance : Virulence
Product : two-component response regulator PilR
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 3885026 - 3886417 bp
Length : 1392 bp
Strand : +
Note : -

DNA sequence : 
ATGCTCGCCAGCCGCCCGGAAGGCGACCCCCGCTTCAGGAACCAGAGCAAGACCATGACCGCGCGCCAGAAAGCCCTGAT
CATCGACGACGAGCCGGACATCCGCGAGCTGCTGGAGATCACCCTCGGCCGTATGAAGCTCGATACCCGCAGCGCACGCA
ACCTCAAGGAGGCGCGCGAGCTGCTGGCACGCGAGCACTACGACCTGTGCCTGACCGATATGCGCCTGCCCGACGGCAGC
GGCCTTGAGCTGGTCCAGCACATCCAGCAACAGTACCCGCAACTGCCCGTGGCGATGATCACCGCCTATGGCAGCCTGGA
TACCGCCATCGGTGCACTCAAGGCCGGTGCGTTCGACTTCCTCACCAAACCGGTGGATCTGAACCGCCTGCGCGAGCTGG
TCAGCACCGCCCTGCGCCTGCGCGCCCCCGCAGCCGAAGCGCCGGTGGACAGTCGCCTGCTGGGCAGCTCGCCGCCGCTG
AAAACCTTGCGCAAGCAGATCGGCAAGCTCGCCCGCAGCCAGGCACCCGTCTACATCAGCGGCGAGTCGGGCAGCGGCAA
GGAACTGGTGGCACGCCTGATTCACGAGCAGGGCCCGCGCAGCGAAAAGCCATTCGTGCCGGTCAACTGCGGTGCCATTC
CGTCGGAGCTGATGGAAAGCGAGTTCTTCGGCCACAAGAAGGGCAGCTTCAGCGGCGCCATCGAGGACAAGCCCGGCCTG
TTCCAGGCCGCGAACGGTGGCACGCTGTTTCTCGACGAGGTGGCGGACCTGCCGCTGCCGATGCAGGTCAAGCTGCTGCG
CGCCATCCAGGAAAAGGCCGTGCGTGCCGTTGGCGGTGCGCAGGAAGTGATGGTCGATGTACGCATCCTCTGTGCCACCC
ACAAGGATCTCGCCAGCGAGGTCGCCGCAGGCCGTTTTCGCCAGGATCTCTACTACCGCCTGAATGTCATCGAACTGCGT
GTACCGCCACTACGCGAACGCCGGGAAGACATCGGCCTGCTCGCCGATGTCATGCTGCGCCGTCTGGCGCAGGAATGCGG
CGAGGCCACGGCCCGCCTGCATCCCGATGCCCTGGCCAAGCTGGAGAACTATCGCTTTCCGGGCAACGTCCGCGAGCTGG
AGAACATGCTCGAACGCGCCTACACCCTGTGCGAAGGCGACGAGATCAAGGCTGGCGACCTGCGCCTGGCGGATAGCCCA
GGCCTGCCGGAAAACGGCGAAGCCAGCCTGGCGCAGATCGACAACCTGGAGGACCACCTGGAGGAGATCGAGCGCAAGCT
GATCATGCAGGCCCTCGAAGAAACACGCTGGAACCGCACCGCGGCCGCCCAGCGACTGGGGCTGACCTTCCGCTCGATGC
GTTACCGTCTGAAGAAACTCGGACTGGACTGA

Protein sequence : 
MLASRPEGDPRFRNQSKTMTARQKALIIDDEPDIRELLEITLGRMKLDTRSARNLKEARELLAREHYDLCLTDMRLPDGS
GLELVQHIQQQYPQLPVAMITAYGSLDTAIGALKAGAFDFLTKPVDLNRLRELVSTALRLRAPAAEAPVDSRLLGSSPPL
KTLRKQIGKLARSQAPVYISGESGSGKELVARLIHEQGPRSEKPFVPVNCGAIPSELMESEFFGHKKGSFSGAIEDKPGL
FQAANGGTLFLDEVADLPLPMQVKLLRAIQEKAVRAVGGAQEVMVDVRILCATHKDLASEVAAGRFRQDLYYRLNVIELR
VPPLRERREDIGLLADVMLRRLAQECGEATARLHPDALAKLENYRFPGNVRELENMLERAYTLCEGDEIKAGDLRLADSP
GLPENGEASLAQIDNLEDHLEEIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 2e-98 50
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 2e-98 50

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pilR YP_004715982.1 two-component response regulator PilR BAC0467 Protein 3e-70 43
pilR YP_004715982.1 two-component response regulator PilR BAC0089 Protein 4e-71 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pilR YP_004715982.1 two-component response regulator PilR VFG1214 Protein 2e-168 85