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Name : PSTAB_3393 (PSTAB_3393) Accession : YP_004715763.1 Strain : Pseudomonas stutzeri ATCC 17588 Genome accession: NC_015740 Putative virulence/resistance : Unknown Product : type I restriction-modification enzyme, R subunit Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : - Position : 3636307 - 3639408 bp Length : 3102 bp Strand : - Note : - DNA sequence : ATGACCGAAGATCAATTGGAACAGGAAACACTCGGCTGGCTCAGTGAGGTGGGGTACGCGCATCTGTATGGCCCGAATAT CGCCTACGACGGCGATAACCCCGAGCGCGAGAGCTATCGCGACGTGCTCTTGACCATGCGCCTGCGCACGGCCATCGCTC GACTCAATCCGCAGGTCCCGCTGGCGGCGCGTGAGGACGCCTTACGGCAGATCCTGGAGTTGGGCGTGCCGGTGCAGCTG TCGGCCAATCGCCTGTTCCATCGTCTGCTGGTCGGCGGTGTGCCGGTGCAATACCAGAAGGACGGTGAGACCCGCGGTGA TTTCGTGCGGTTGATCGACTGGGCTGATGTGCGAGCCAACGAGTGGCTGGCGATCAACCAGTTCAGCATCCAGGGGCCGA AACATACACGCCGGCCGGACATCATCCTGTTCGTCAACGGCCTGCCGCTGGTGCTGCTGGAGCTGAAGAACCCTGCGGAT GTGAATGCCGACCTGGTCAAGGCGTTCGACCAGCTCCAGACCTACAAGGAGCAGATTCCTGACGTCTTTCACTACAACGA GATTCTGGTTATCAGCGATGGCAGTGAGGCGCGCATGGGCTCCTTGTCGGCAGACTGGGAGCGGTTTGCTCGCTGGCGCA CCATCGACGGCGTGACGGTTGATCCGCTTGGTGAGTTCAACGAGCTGGAGACGCTGGTGCGTGGTGTATTGCAGCCGGCG ACGCTGCTGGATTACCTGCGCTACTTCGTACTGTTCGAGGATGATGGTCGGCTGGTGAAGAAGATCGCCGGCTATCACCA GTTCCATGCCGTGCGTGCGGCGATCCAACAGGTGGTCAGCGCTTCGCGCCCCGGCGGCACGCATAAGGGAGGGGTGGTCT GGCATACCCAGGGCTCGGGCAAGAGCATCACCATGACCTGCTTCGCCGCCCGTGTGATGCAGGAAGCGGCGATGGAGAAC CCGACCATCGTGGTGATCACCGACCGCAATGACCTGGACGGCCAGTTGTTCGGCGTGTTCTCGCTGTCGCAGGATCTGCT GCGTGAACAGCCGGTGCAGGTGGCCACCCGTGGTGACTTGCGCGAGAAACTGGCCAACCGCCCCAGTGGCGGCATTGTCT TTGCCACCATCCAGAAGTTCATGCCGGGCGAGGATGAAGACAGCTTCCCAGTGTTGTCCGCACGCTCGAATATCGTGGTG GTGGCCGACGAGGCGCACCGCACCCAGTACGGCTTCAGTGCTTCGCTGAAGGTGCCGGACCTTAAGGTGGCGGAGGCCAG TGCTCGATATCAGGTGGGTTATGCCCAGCACCTGCGCGACGCTCTGCCCAACGCTACCTTCGTGGCCTTTACCGGTACGC CGGTGTCCAGCGAAGACCGTGATACCCGGGCGGTATTCGGCGACTACATCCACGTCTACGACATGCAGCAGGCCAAGGAA GATGGCGCCACCGTGGCCATCTACTACGAGTCGCGGCTGGCCAAGTTGTCGCTCAAAGACTCGGAGCTGGCGCATATCGA CGACGAGGTCGACGAGCTGGCCGAAGATGAGGAAGAGGATCAGCAGTCGCGCTTGAAGTCGCGCTGGGCCGCGTTGGAAA AAGTCGTGGGGGCCGAGCCGCGTATCAAGAGCGTGGCGGCCGATCTGGTGGCGCACTTCGAGGAGCGCAACCAGGCGCAA AGCGGCAAGGCCATGGTGGTGGCCATGAGTCGCGAGATCTGCGTGCACCTGTACAACGAGATCATCGCTCTGCGCCCCGA ATGGCACGACGAGGACCCGGAGAAGGGCGCGGTGAAGATCGTTATGACCGGTAGCGCATCGGACAAGGCACTGCTGCGCC CGCATATTTATCCCGGCCAGGTGAAGAAACGCTTGGAGAAGCGTTTCAAGGATCCTGCTGATCCGCTGCAACTGGTGATA GTCCGCGACATGTGGCTGACTGGCTTCGATGCGCCTTGCGTGCATACCCTGTATGTCGACAAACCGATGAAGGGCCACAA TCTGATGCAGGCCATCGCCCGGGTGAACCGGGTGTTCAAGGACAAGCAGGGTGGCCTGGTGGTGGATTACATCGGCATTG CCAACGAACTGAAGGCGGCGCTCAAGGAGTACACCGCCAGCAAGGGCAGGGGGCGGCCCACCGTCGATGCGTACGAAGCC TACGCGGTGCTGGAGGAAAAGCTCGATGTGTTGCGCAGCCTGCTGCACGGCTTTGACTACAGCGATTTCCTGACCGGCGG GCACAAGCTGCTGGCCGGTGCTGCCAACCATGTGCTGGGGCTGGAGGACGGCAAAAAGCGCTTTGCTGACAATGCGTTGG CCATGAGCAAGGCTTTTACCCTGTGCTGCACCCTGGACGAGGCCAAGGCGGTACGTGAGGAAGTGGCTTTCCTGCAGGCC ATCAAGGTGCTGCTGACGAAGCGCGAGATCAGCGCCAAGAAAAAGACCGATGAAGAGCGCGAGCTAGCCATCCGCCAGAT CATCGGAAATGCAGTTGTCTCTGGGGATGTCGTTGATGTATTCGCGGCGGTTGGCTTGGACAAGCCCAATATCGGCCTGC TGGATGACGAGTTCCTCGCCGAGGTGCGCAACCTGCCGGAGAAGAACCTCGCCGTTGAGTTGCTGGAGCGCCTGCTGGAA GGCGAGATCAAGAGCAAGTTCGCCAGCAATCTGGCCCAGGAGAAGAAGTTCTCTGAACTGCTCGATAGCGTAATCAAGCG CTACCAGAACCGTTCCATCGAAACCGCCCAGGTCATCGAAGAGCTGATCGAGATGGCCAAGAAGTTCGCCGCTGCCAGCA AGCGCGGTGACCAGTTGGGGCTGAATGACGATGAATTGGCTTTCTACGATGCCTTGGCTAATAACGAAGCTTCGGTACGT GAGCTGGGTGACGAGATTCTCGCCAAGATTGCCCATGAACTCACCGACAGCCTGCGCCAGAACGTAACGGTCGATTGGAG TAATCGAGACAGTGTGCGTGCCAAACTGAGGCTTTTGGTTAAGCGCATCCTGCGCAAATACAAATACCCGCCGGATCAGC AGGAGGAGGCGGCGCAGCTGGTACTGGCGCAGGCGGAGACGCTGTGTGAGGCGTGGATGTAG Protein sequence : MTEDQLEQETLGWLSEVGYAHLYGPNIAYDGDNPERESYRDVLLTMRLRTAIARLNPQVPLAAREDALRQILELGVPVQL SANRLFHRLLVGGVPVQYQKDGETRGDFVRLIDWADVRANEWLAINQFSIQGPKHTRRPDIILFVNGLPLVLLELKNPAD VNADLVKAFDQLQTYKEQIPDVFHYNEILVISDGSEARMGSLSADWERFARWRTIDGVTVDPLGEFNELETLVRGVLQPA TLLDYLRYFVLFEDDGRLVKKIAGYHQFHAVRAAIQQVVSASRPGGTHKGGVVWHTQGSGKSITMTCFAARVMQEAAMEN PTIVVITDRNDLDGQLFGVFSLSQDLLREQPVQVATRGDLREKLANRPSGGIVFATIQKFMPGEDEDSFPVLSARSNIVV VADEAHRTQYGFSASLKVPDLKVAEASARYQVGYAQHLRDALPNATFVAFTGTPVSSEDRDTRAVFGDYIHVYDMQQAKE DGATVAIYYESRLAKLSLKDSELAHIDDEVDELAEDEEEDQQSRLKSRWAALEKVVGAEPRIKSVAADLVAHFEERNQAQ SGKAMVVAMSREICVHLYNEIIALRPEWHDEDPEKGAVKIVMTGSASDKALLRPHIYPGQVKKRLEKRFKDPADPLQLVI VRDMWLTGFDAPCVHTLYVDKPMKGHNLMQAIARVNRVFKDKQGGLVVDYIGIANELKAALKEYTASKGRGRPTVDAYEA YAVLEEKLDVLRSLLHGFDYSDFLTGGHKLLAGAANHVLGLEDGKKRFADNALAMSKAFTLCCTLDEAKAVREEVAFLQA IKVLLTKREISAKKKTDEERELAIRQIIGNAVVSGDVVDVFAAVGLDKPNIGLLDDEFLAEVRNLPEKNLAVELLERLLE GEIKSKFASNLAQEKKFSELLDSVIKRYQNRSIETAQVIEELIEMAKKFAAASKRGDQLGLNDDELAFYDALANNEASVR ELGDEILAKIAHELTDSLRQNVTVDWSNRDSVRAKLRLLVKRILRKYKYPPDQQEEAAQLVLAQAETLCEAWM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 58 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 48 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 48 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 47 |
