Gene Information

Name : PSTAB_0307 (PSTAB_0307)
Accession : YP_004712677.1
Strain : Pseudomonas stutzeri ATCC 17588
Genome accession: NC_015740
Putative virulence/resistance : Unknown
Product : S1 RNA-binding domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG2183
EC number : -
Position : 345901 - 348219 bp
Length : 2319 bp
Strand : -
Note : -

DNA sequence :
ATGGACAGCATCAATTCCCGTATCGCCAACGAGCTGGGCGTACGCCCGCAACAGGTCGCCGCCGCCGTGGCGCTGCTCGA
CGAAGGCTCCACCGTTCCCTTCATCGCCCGCTATCGCAAGGAAGTCACCGGCAGCCTCGACGATACCCAGCTGCGTAACC
TGGAAGAGCGCCTGCGCTACCTGCGCGAGCTGGACGAGCGCCGCATCTCGATCCTTGCCAGCATCGAGGAACAGGGCAAG
CTGACCCCCGAGCTCAAGCGCGAGATCGACCTCGCCGACACCAAGACCCGCCTCGAAGACCTCTACCTGCCCTACAAGCA
GAAGCGCCGCACCAAGGGCCAGATCGCCCTGGAAGCCGGTCTCGGCGAGCTGGCCGATGCGTTGTTCGGCAATCCCGAGT
TGAATCCTGAAAGCGAAGCCACCCGTTTTATCGACGCTGAGAAGGGCTTCGCCGATGTGAAGGCCGTGCTCGAAGGCGCC
AAGTACATCCTCATGGAGCGCTTCGCCGAGGACGCCGATCTGCTGGCCAAGCTGCGGGACTTCCTCAAGCACAACGCCAC
CCTCAGTGCCCGCGTCGTACCGGGCAAGGAAACCGAAGGCGCCAAGTTCAGCGACTACTTCGAACACGACGAGGTGCTGA
AGAACACCCCCTCGCACCGGGCACTGGCGATCTTCCGCGGGCGCAACGAGGGCATCCTCAGCGTCAGCCTCAAGGTCGGC
GACGAGACCCCGGGCAGCATGCACCCGGGCGAAGGCATGATCGGCGAGCGCTTCGGCATCGCCAACCGGGGCCGCGCCGC
CGACAAGTGGCTGGCCGAGGTGGTGCGCTGGACCTGGAAGGTCAAGCTCTACACCAGCCTGGAAACCGACCTGCTCGGCG
AGCTGCGCGACAAGGCCGAAGACGAGGCGATCTCGGTGTTCGCCCGTAACCTGCATGACCTGCTGCTGGCTGCGCCGGCC
GGCCCGCGCGCGACCCTGGCGCTGGACCCGGGCCTGCGCACCGGCTGCAAGGTCGCAGTGGTCGACGCCACCGGCAAGCT
GCTGGAAACCGCCACCGTCTACCCGCACGCCCCGCGCAACGACTGGGACGGCACCCTGGCAATCCTCGCCAAGCTGTGCG
CCAAGCATGCCGTCGACCTGATCGCCATCGGCAACGGCACTGCCAGCCGCGAGACCGACAAGCTGGCGGGCGAGCTGATC
AAGAAGGTACCGGGTCTGAAGCTCACCAAGATCATGGTCAGCGAAGCCGGCGCCTCGGTGTATTCGGCCTCGGAGCTCGC
CGCCCGCGAATTCCCGGATCTGGACGTCTCCCTGCGCGGTGCCGTCTCCATCGCCCGCCGCCTGCAGGACCCGCTGGCCG
AGCTGGTGAAGATCGACCCGAAGTCCATCGGCGTCGGCCAGTACCAGCACGACGTGTCCCAGCTCAAGCTGGCGCGTTCG
CTGGATGCCGTGGTCGAGGACTGCGTGAACGCCGTCGGCGTCGACGTCAACACCGCTTCCGCCGCGCTGCTGGCGCGCAT
CTCCGGCCTCAACGCGACGCTGGCGCAGAACATCGTGCAGTTCCGCGATGCCAACGGTGCGTTCAAGTCCCGCAGCGAGC
TGAAAAAGGTCCCGCGCCTGGGCGAGAAGACCTTCGAACAGGCCGCCGGCTTTCTTCGCGTGATGAACGGCGACAACCCG
TTGGACGCCTCTGCCGTTCACCCGGAAACCTATCCGCTGGTGCAACGCATCGCCCAGGACACCGGCCGCGACATCCGCTC
GCTGATCGGCGACTCGGCCTTCCTCAAGCGCCTGGACCCCAAGCAGTTCACCGACGAGACCTTCGGCCTGCCCACCGTCA
CCGACATTCTCTGCGAGCTGGACAAGCCCGGCCGCGACCCGCGTCCGGAGTTCAAGACCGCCGAGTTCCAGGACGGCGTG
GAGAAGCTCAGCGATCTGGAGCCGGGCATGGTGCTCGAAGGCGTGGTGACCAACGTCACCAACTTCGGCGCCTTCGTCGA
CATCGGCGTGCACCAGGATGGCCTGGTACACATCAGCGCGCTCTCGGAGAAGTTCGTCAAGGATCCCTACGAGGTGGTCA
AGGCCGGCGACATCGTCAAGGTCAAGGTCATGGAAGTGGATATCCCACGCAACCGCGTCGGCCTGTCCATGCGCATGAGC
GACACGCCCGGTGCCAAGACCGACGGCCCGCAGCGCAGCGGTGGCAAGCCACGAGGCAATGCGCCGCGTAGCGAGCGCCA
CGCCAGGGAGGACAAGCCGGCACCGGCCAATGCCGCCATGGCCGCGTTGTTCGCCAACGCCAAGCAGCTGAGGAAATAA

Protein sequence :
MDSINSRIANELGVRPQQVAAAVALLDEGSTVPFIARYRKEVTGSLDDTQLRNLEERLRYLRELDERRISILASIEEQGK
LTPELKREIDLADTKTRLEDLYLPYKQKRRTKGQIALEAGLGELADALFGNPELNPESEATRFIDAEKGFADVKAVLEGA
KYILMERFAEDADLLAKLRDFLKHNATLSARVVPGKETEGAKFSDYFEHDEVLKNTPSHRALAIFRGRNEGILSVSLKVG
DETPGSMHPGEGMIGERFGIANRGRAADKWLAEVVRWTWKVKLYTSLETDLLGELRDKAEDEAISVFARNLHDLLLAAPA
GPRATLALDPGLRTGCKVAVVDATGKLLETATVYPHAPRNDWDGTLAILAKLCAKHAVDLIAIGNGTASRETDKLAGELI
KKVPGLKLTKIMVSEAGASVYSASELAAREFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLKLARS
LDAVVEDCVNAVGVDVNTASAALLARISGLNATLAQNIVQFRDANGAFKSRSELKKVPRLGEKTFEQAAGFLRVMNGDNP
LDASAVHPETYPLVQRIAQDTGRDIRSLIGDSAFLKRLDPKQFTDETFGLPTVTDILCELDKPGRDPRPEFKTAEFQDGV
EKLSDLEPGMVLEGVVTNVTNFGAFVDIGVHQDGLVHISALSEKFVKDPYEVVKAGDIVKVKVMEVDIPRNRVGLSMRMS
DTPGAKTDGPQRSGGKPRGNAPRSERHAREDKPAPANAAMAALFANAKQLRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 0.0 63