Gene Information

Name : soxR (PSTAB_2801)
Accession : YP_004715171.1
Strain : Pseudomonas stutzeri ATCC 17588
Genome accession: NC_015740
Putative virulence/resistance : Resistance
Product : putative MerR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 3008966 - 3009400 bp
Length : 435 bp
Strand : +
Note : -

DNA sequence : 
ATGCGCATTGGTCAGTTAGCCCAGATAGCGGGTATCGACACGCAGACGATCCGCTTCTATGAGCAGCAGGGCCTGTTGCC
GCCGCCAGAACGGCAGGAGAATGGTTACCGTGTCTATACCGAGAAGCATGGCGAGTGGCTTGCCTTTATCCGCCGCTGCC
GAATTCTGGACCTGTCACTGACAGAGATTCGCGAGCTACAGAGCTATCAGGACGACCCTCGCCAGCCTTGTACCGCCGTC
AACGCCATGCTCGATGACCACATCTCTCATGTGCGGTCGCAGATAACTGCTCTGCAAGCGCTTGAGCAACAACTCGTTTC
ACTGAGGGCGAGTTGCAACGAGGGTCGGGAGATCAATGCCTGCGGCATCCTGACGGGGATCAGCGAGGAGAGCAAACAAC
AGCTGTATAGGGCTAGCTCAGGCCGTAAGGACTGA

Protein sequence : 
MRIGQLAQIAGIDTQTIRFYEQQGLLPPPERQENGYRVYTEKHGEWLAFIRRCRILDLSLTEIRELQSYQDDPRQPCTAV
NAMLDDHISHVRSQITALQALEQQLVSLRASCNEGREINACGILTGISEESKQQLYRASSGRKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 1e-50 82
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 1e-50 82
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 7e-51 82
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 7e-51 82
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 7e-51 82
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 6e-51 82
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 9e-51 82
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 1e-30 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
soxR YP_004715171.1 putative MerR family transcriptional regulator BAC0301 Protein 8e-26 49
soxR YP_004715171.1 putative MerR family transcriptional regulator BAC0058 Protein 4e-30 46