Gene Information

Name : radC (PSTAB_2253)
Accession : YP_004714623.1
Strain : Pseudomonas stutzeri ATCC 17588
Genome accession: NC_015740
Putative virulence/resistance : Virulence
Product : DNA repair protein RadC
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2003
EC number : -
Position : 2425887 - 2426384 bp
Length : 498 bp
Strand : +
Note : -

DNA sequence : 
ATGCGCCTGCACAAGCTGAAAGCCAGTGACACGACAGGCACCTACCTGGTCGAGTCGCCGGTGACGGAAAACGACATCCT
GCTGATGGCCAAGCAACTGGCCAGTCTGCGCCTGCGCAAGGGCCGAGCACTGACTTCCCCCAAGGACGTGTTCTGCCACC
TGCAAACATTGCTGGCCAACTATGAGCATGAAGTATTTGCCCTGCTCATGCTCGACAGCCGGCACCGAGTGATCGCATTT
GAGGAAGTGTTTCGCGGCACGCTGGATAGCGCCAGCGTCTACCCACGGGAGGTCGTGAAGCTCGCCCTGGAGCACAACGC
CGCTGCCCTGATCCTGGTGCACAACCACCCTTCGGGAGACCCTGAGCCCAGCATGGCGGATCGCAATCTCACCACAAAAC
TGCAGGACGCGCTGAATCTGGTCGGAGTTAGAACGCTCGATCACGTTGTGGTGGGGAACGAAGGCTGCGTGTCACTGGCC
GAACGGGGATACCTCTAA

Protein sequence : 
MRLHKLKASDTTGTYLVESPVTENDILLMAKQLASLRLRKGRALTSPKDVFCHLQTLLANYEHEVFALLMLDSRHRVIAF
EEVFRGTLDSASVYPREVVKLALEHNAAALILVHNHPSGDPEPSMADRNLTTKLQDALNLVGVRTLDHVVVGNEGCVSLA
ERGYL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0395_A1383 YP_001217326.1 DNA repair protein RadC Not tested VPI-2 Protein 8e-32 54
VC1786 NP_231421.1 DNA repair protein RadC Not tested VPI-2 Protein 8e-32 54
VPI2_0034 ACA01849.1 DNA repair protein RadC Not tested VPI-2 Protein 5e-32 54
VC0510 NP_230161.1 DNA repair protein RadC-like protein Not tested VSP-2 Protein 6e-32 53
radC AAN62140.1 putative DNA repair protein RadC Not tested PAGI-2(C) Protein 3e-23 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
radC YP_004714623.1 DNA repair protein RadC VFG1119 Protein 2e-32 54