Gene Information

Name : PSTAB_2146 (PSTAB_2146)
Accession : YP_004714516.1
Strain : Pseudomonas stutzeri ATCC 17588
Genome accession: NC_015740
Putative virulence/resistance : Unknown
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : -
Position : 2297321 - 2298982 bp
Length : 1662 bp
Strand : +
Note : -

DNA sequence :
ATGTCCGAAGTTTCGATTGGCGAGAACCTGGTCGAGGTCCGCGACCTTGCCGTCGAGTTCGTCACCGGCGATCAGGTCCA
GCGCGTGGTAGAGGGCGTGTCCTTCGACATCCGCAAGGGCGAAACCCTGGCGCTGGTGGGCGAAAGCGGCTCGGGCAAGT
CGGTCACCGCGCATTCCATCCTGCGCCTGCTGCCCTACCCGCTGGCCCGCCATCCCCAGGGAGAGATTCATTTCCACGGG
CAGGACCTGATCAAGGCGGACGAAAAAGCCATGCGCAAGATCCGTGGCAACCGTATCGCCATGGTCTTCCAGGAGCCCAT
GACCTCGCTCAACCCGCTGCACACGGTGGGCAAGCAGATCAACGAGGTACTGGAAATCCACAAGGGCCTGCGCGGCAAGG
CCGCCAGTGCCCGCACGCTGGAATTGCTCGAGCTGGTGGGCATACCGGAGCCGCGCAAGCGCATCCGCGCCTACCCGCAC
GAACTGTCCGGCGGCCAGCGCCAGCGCGTGATGATCGCCATGGCCCTGGCCAACGAGCCGGAGCTGCTGATCGCCGATGA
ACCGACCACGGCGCTGGACGTTACCGTGCAGCTGAAGATCCTCGAACTGCTCAAGGAACTGCAGGCGCGGTTGGGCATGG
CGTTGCTGCTGATCAGCCACGACCTCAACCTGGTTCGGCGGGTCGCCCATCGCGTATGTGTCATGCAGCGCGGTCGTGTC
GTCGAACAGGCGTTGTGTGAAGAACTGTTCCGTTCGCCCAAGCATCCGTACACCCAGGAACTGCTCGCGGCCGAGCCCAG
CGGTGGGCCGGTGGAGGTCGAGCAGGCGGCACCGCTGCTGGAGGTCGAGGATCTGCGCGTCTGGTTCCCGATCAAGAAGG
GCCTGCTGCGGCGTACCGTCGATCACATCAAGGCGGTCGACGGCGTGAACTTCAGCCTGCCCCGGGGGCAGACGCTGGGG
ATCGTCGGCGAAAGCGGCTCGGGCAAGTCGACCCTGGGGTTGGCTATCCTTCGTCTGTTGTCCAGTCGCGGCGAGATCCG
CTTCCAGGGTCAGCAGCTGCAGGGCATGTCGCAGCGCGCCGTGCGGCCGTTGCGCCGGCAGATGCAGGTGGTTTTCCAGG
ACCCCTACGGCAGCCTGAGCCCGCGGATGTCGGTCGGGCAGATCATCGGCGAAGGGCTGCGCATTCACCACATGGGTAAT
GCGCAGGAGCAGGAACAGGCAATCATTGACGCGCTCGTGGAGGTTGGTCTCGATCCGGAAACCCGGCATCGCTACCCCCA
CGAGTTTTCCGGCGGGCAACGGCAACGCATTGCCATTGCCCGGGCTCTGGTGTTGAAGCCGGCGCTGATACTGCTCGACG
AGCCGACCTCGGCGCTCGATCGCACGGTACAGCGTCAGGTGGTGGAGCTCCTGCGCTCGTTGCAGGCCAAGTACAACCTG
ACCTACCTGTTCATCAGCCATGACCTGGCGGTGGTCAGGGCGCTGAGCCACCAGATGATGGTGGTCAAGCAGGGCCAGGT
GGTGGAACAGGGGGCGGCTGCCGAGATATTCGCGGCACCGCAACATCCGTATACACAGCAGCTGCTGGAATCCGCCTTCA
TGGCGCCCGGCGCTGCCGAACAACCAGAAGAGGGACAAGCACATGGGTTTTCTCACCGGTAA

Protein sequence :
MSEVSIGENLVEVRDLAVEFVTGDQVQRVVEGVSFDIRKGETLALVGESGSGKSVTAHSILRLLPYPLARHPQGEIHFHG
QDLIKADEKAMRKIRGNRIAMVFQEPMTSLNPLHTVGKQINEVLEIHKGLRGKAASARTLELLELVGIPEPRKRIRAYPH
ELSGGQRQRVMIAMALANEPELLIADEPTTALDVTVQLKILELLKELQARLGMALLLISHDLNLVRRVAHRVCVMQRGRV
VEQALCEELFRSPKHPYTQELLAAEPSGGPVEVEQAAPLLEVEDLRVWFPIKKGLLRRTVDHIKAVDGVNFSLPRGQTLG
IVGESGSGKSTLGLAILRLLSSRGEIRFQGQQLQGMSQRAVRPLRRQMQVVFQDPYGSLSPRMSVGQIIGEGLRIHHMGN
AQEQEQAIIDALVEVGLDPETRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRSLQAKYNL
TYLFISHDLAVVRALSHQMMVVKQGQVVEQGAAAEIFAAPQHPYTQQLLESAFMAPGAAEQPEEGQAHGFSHR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 5e-81 44
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 5e-81 44
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 5e-81 44
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 5e-81 44
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 7e-100 43