Gene Information

Name : PSTAB_2086 (PSTAB_2086)
Accession : YP_004714456.1
Strain : Pseudomonas stutzeri ATCC 17588
Genome accession: NC_015740
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1593
EC number : -
Position : 2233427 - 2234704 bp
Length : 1278 bp
Strand : -
Note : -

DNA sequence : 
ATGACCGTCGTCGTCTTCCTCTCTTCGTTGCTGGGCTTCATGACGCTTGGCATGCCCATCGCCTTCGCACTGCTGCTCAC
CGGCTCGGTGCTGATGTGGTACCTGGATTTCTGGGACGTGCAACTGCTCGCGCAGAACCTGCAGGCTGGCGCTGACAGCT
TCCCGCTGCTGGCGGTGCCGTTCTTCATCCTGGCCGGCGAGCTGATGAATGCGGGTGGCATCTCACGGCGCATCATCGCC
ATGGCGCAGGCCTATTTCGGCCACAAGCGTGGCGGCTTGGGTTACGTCGCGATTGCCGCTTCGGTGCTGTTGGCCAGCAT
GTCCGGCTCGGCATTGGCCGATACCGCCGCGCTGGCGACGCTGCTGCTGCCGATGATGCGCGAGCGCGGCTACCCGCTGA
GTTCGTCGTCGGGCCTGGTGGCGGCGGGCGGGATCATCGCCCCGATCATTCCGCCGTCGATGCCGTTCGTGATCTACGGC
GTGGTGACCGGCACGTCGATCAGCCAGCTGTTTCTCGCCGGCATGGTGCCGGGGCTGATCATGGGCATGGGCCTGATCGT
CGCCTGGACGCTGATCGCCCGGCGGATCGACGAACCGAAGCAGGAAAAGGCCAGCGGTGCCGTGCGCCGCCGCGTGCTGG
TCGATGGGGCGGCGGCGCTGATGCTGCCGGTGATCATCGTCGGCGGCCTGCGCGGCGGGCTGTTCACCCCGACCGAAGCC
GCCGTGGTCGCCGCGGTCTACGCGCTGGCGGTCTCGACCCTGCTGTATCGCGAACTGACCTGGGCCGGGCTGGTCGAGGT
GCTCACGCGTGCCAGCCGCACCACGGCGTCGGTGATGTTTCTCTGCGCCGCGGCGACGGTATCGGCGTACATGATCACCC
TGGCCCAGCTGCCCGACGAGATCGCGGCGATGCTCGGTCCGCTGGCGCAGGATCCCAAGCTGCTGATGGTCGCCATCATG
CTGCTGATGATCGCTGTCGGCATGGTGCTGGACCTGACCCCGACCATTCTGATCCTCGGTCCGGTGCTGGCGCCGATCGC
GATCAAGGCCGGCATCGATCCGGTGTATTTCGGCGTGATGTTCGTGCTGATCGGTTCCATCGGGCTGATCACCCCGCCGG
TAGGCACCGTGCTCAACGTGGTCGGCGGCATCGGCCGGCTGCGCATGGAAACCCTGGTGCGCGGCGTGATGCCGTTCTTC
CTGGTCTACCTGGTGATCGTCGGGCTGCTCATAGCCGTGCCCTCGATCATCACCGTACCCCTGGCCTGGCTGCGGTAA

Protein sequence : 
MTVVVFLSSLLGFMTLGMPIAFALLLTGSVLMWYLDFWDVQLLAQNLQAGADSFPLLAVPFFILAGELMNAGGISRRIIA
MAQAYFGHKRGGLGYVAIAASVLLASMSGSALADTAALATLLLPMMRERGYPLSSSSGLVAAGGIIAPIIPPSMPFVIYG
VVTGTSISQLFLAGMVPGLIMGMGLIVAWTLIARRIDEPKQEKASGAVRRRVLVDGAAALMLPVIIVGGLRGGLFTPTEA
AVVAAVYALAVSTLLYRELTWAGLVEVLTRASRTTASVMFLCAAATVSAYMITLAQLPDEIAAMLGPLAQDPKLLMVAIM
LLMIAVGMVLDLTPTILILGPVLAPIAIKAGIDPVYFGVMFVLIGSIGLITPPVGTVLNVVGGIGRLRMETLVRGVMPFF
LVYLVIVGLLIAVPSIITVPLAWLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1777 NP_231412.1 hypothetical protein Not tested VPI-2 Protein 2e-39 41
VC0395_A1375 YP_001217318.1 hypothetical protein Not tested VPI-2 Protein 2e-39 41
VPI2_0025c ACA01842.1 TRAP dicarboxylate transporter DctM subunit Not tested VPI-2 Protein 2e-39 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSTAB_2086 YP_004714456.1 hypothetical protein VFG1110 Protein 1e-39 41