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Name : xcpS (PSTAB_0186) Accession : YP_004712556.1 Strain : Pseudomonas stutzeri ATCC 17588 Genome accession: NC_015740 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 208330 - 209544 bp Length : 1215 bp Strand : + Note : - DNA sequence : ATGGCTGCCTTCGAATACCTCGCCCTCGACCCCCGTGGCCGTGAGCAGAAGGGCCTGATCGAGGCCGACAGCCCGCGTCA GGCGCGGCAGTTGCTGCGCGAGAAGCAGTGGGCGCCGCTGGAGGTGAAGCAGGCCAAGTCCAAGGAAGACGTCAGCCGTG GCGGCTTCAGTTTCGGCCGCGGCCTGTCGGCGCGTGATCTGGCATTGGTCACCCGGCAGCTGGCGACGCTGGTGCAGGCC GCGCTGCCCATCGAGGAAGCCCTGCGCGCGGCGGCCGCGCAGTCCACCTCGGCGAAGATCAAGTCGATGCTGCTGGCGGT GCGCGCGCGGGTGATGGAAGGCCACAGCCTGGCCGCGGCACTGCGCGAATATCCGTCGGCCTTTCCCGAGCTTTACCGCG CCACCGTGGCGGCCGGGGAGCACGCCGGCCATCTCGGGCTGGTGCTCGACCAGCTGGCCGACTACACCGACCAGCGTCAG CAATCGCGGCAGAAGATCCAGCTGGCGCTGCTCTATCCGGTGATCCTGATGGTCGCCTCGCTGGCCATCGTCGTGCTGCT GCTCGGCTACGTGGTGCCGGACGTGGTCAAGGTATTCGTCAACACCGGGCAGGAACTGCCGGCGCTGACCCGCGGGCTGA TCGCCACCAGCGACGTGGTGAAGAACTGGGGCTGGCTGATCGTGCTCGGCCTTGTCGGCGCGTTCCTGGCCATGCGTGCG GCCCTGCGCGACCCGGCGCTGCGCCTGCGCTGGCATGCGTTCATCCTGCGGATACCGCTGATCGGTCGGCTGAGCCGGGC GACCAATACCGCGCGCTTCGCCTCCACCCTGGCGATCCTGACGCGCAGCGGCGTGCCGCTGGTGGAAGCGCTGTCCATCG CCGCTGCGGTGATCGCCAACCTGCGCATCCGCGAGCGGGTGGTCGAGGCGGCGCAGAAGGTGCGTGAAGGCAGCAGCCTG ACCCGTGCGCTGGATGCCACCGGGGAATTCCCGCCGATGATGCTGCACATGATCGCCAGCGGGGAGAAATCCGGTGAACT GGATCAGATGCTGGCGCGAACCGCGCGCAATCAGGAGAACGACCTGGCCGCCCAGGTGTCTCTGCTGGTCGGCCTGTTCG AGCCGTTCATGCTGGTGTTCATGGGGGCGGTGGTGCTGGTCATCGTGCTGGCCATCCTGATGCCGATCCTCTCTCTCAAC CAACTGGTGGGTTAA Protein sequence : MAAFEYLALDPRGREQKGLIEADSPRQARQLLREKQWAPLEVKQAKSKEDVSRGGFSFGRGLSARDLALVTRQLATLVQA ALPIEEALRAAAAQSTSAKIKSMLLAVRARVMEGHSLAAALREYPSAFPELYRATVAAGEHAGHLGLVLDQLADYTDQRQ QSRQKIQLALLYPVILMVASLAIVVLLLGYVVPDVVKVFVNTGQELPALTRGLIATSDVVKNWGWLIVLGLVGAFLAMRA ALRDPALRLRWHAFILRIPLIGRLSRATNTARFASTLAILTRSGVPLVEALSIAAAVIANLRIRERVVEAAQKVREGSSL TRALDATGEFPPMMLHMIASGEKSGELDQMLARTARNQENDLAAQVSLLVGLFEPFMLVFMGAVVLVIVLAILMPILSLN QLVG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-64 | 50 |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 2e-64 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| xcpS | YP_004712556.1 | general secretion pathway protein F | VFG0181 | Protein | 7e-124 | 79 |
| xcpS | YP_004712556.1 | general secretion pathway protein F | VFG2049 | Protein | 3e-63 | 48 |
| xcpS | YP_004712556.1 | general secretion pathway protein F | VFG1870 | Protein | 7e-65 | 43 |
