Gene Information

Name : PSTAB_1196 (PSTAB_1196)
Accession : YP_004713566.1
Strain : Pseudomonas stutzeri ATCC 17588
Genome accession: NC_015740
Putative virulence/resistance : Unknown
Product : plasmid-like protein
Function : -
COG functional category : K : Transcription
COG ID : COG0553
EC number : -
Position : 1252734 - 1255007 bp
Length : 2274 bp
Strand : +
Note : -

DNA sequence :
ATGTCCCTCGATCTCGAAACCGTTCCCGAAACCGCTGTGCAGGGCGACCTGCTCGAAACGGCTGCTTCACCCCTCACGCT
CAGCCTGCAGGACTTCGTATCGGAGTTCGGCGACGAGTTGCTCGATTCGCTGAACCGCGCCAATCCTCCGGTCTACACTG
GCCAGGTGCGGGTGCATAGGCAACTGATCCTCGCCGCGCTCAAGCGCAAGCTGTTCCCGGCGCAAGCCGATGTGGTCCAT
GCCGTCACCGAGCTACTGGTAGACCGCGGCGAACGCGCCGCGATCGTCAATGGCGAGATGGGTTGCGGCAAGACGACCGT
CGGCATCGCCACGGCCGCCGTGCTCAACGCCGAGGGCTACCGCCGCACCCTGGTGCTCTCGCCACCCCACTTGGTCTACA
AGTGGCGGCGCGAAATCCAGGAGACGGTGGCCGGTGCCAAGGTCTGGGTGCTCAATGGCCCGGACACGCTGGTCAAGCTG
CTGAAACTGCGCGAGCAGTTGGGCGTGCCGGCCCAGGGCCAGGAGTTCTTCGTCCTGGGCCGCGTGCGGATGCGGATGGG
GTTCCACTGGAAGCCTGTCTTCGTTCGGCGGCGCACGCCTCACGGCGACGTGGGGGCCTGCCCGGATTGCGGGCATGTCA
TCACCGACCTCGACGGCGAGCCGATCAACCCGGTCGCGCTCGAAGCCGAGGAGTCCCGCCGCAAGTGCAGCCACTGCCGT
GCACCGCTGTGGTCGTTGATCCGTCCCAGAGGCCTGTCCGCCAGCGACCAGTCCTCGACCGTGCTCAAGGCACTGAAGCG
CATTCCAACCATTGGCGAAGTCACCGCGCAGAAGCTGATGCAGAAGTTCGGTGACGCCTTCCTCGCGTCGATGCTCGGGG
ACAACATCCACGAGTTCATCAACCTGATGGATGGCAACGGCGAGCTGGTCTTCTCGGACCGGCAAGCCCACCGGATGGAA
CGCGCGATGGCCAACATGGAGTTCGGCTTCGGCGAGGGCGGCTACCAGCCGTCCGAGTTCATCAAGAGGCAGCTTCCCCA
AGGCACGTTCGACCTGCTCATCGCCGACGAGGCGCACGAGTACAAGAACGGCGGCTCCGCACAGGGCCAGGCCATGGGGG
TGTTGGCGGCCAAGGCGCGCAAGACGCTATTGCTCACCGGCACGCTGATGGGCGGCTACGGCGACGACCTGTTCCACCTG
CTGTTCCGCGCCCTGCCGGGGCGGATGATCGAAGACGGCTACCGGCCGACGAAGAGCGGCAGCATGACCTCGGCCGCGAT
GGCGTTCATGCGCGATCACGGTGTCTTGAAGGACATCTACTCCGAGAGCACCGGCACGGCGCACAAGACGGCCAAGGGCA
CCAAGGTATCGGTGCGCACGGTCAAGGCGCCGGGTTTCGGTCCCAAGGGCGTACTGCGTTGCGTCCTGCCGTTCACGGTC
TTCCTCAAGTTGAAGGACATCGGTGGCAACGTGCTGCCGCCCTACGACGAGGAGTTCCGCGAAGTCGCGATGGACACGGC
GCAAGCCGCGGCCTACCGCGATCTGGCGGGTCGCCTGACCCAGGAGCTGAAGCAGGCCCTGGCGAAGCGCGACACGACGC
TGCTCGGTGTGGTCCTCAACGTGCTGCTGGCCTGGCCGGACTGCTGCTTCCGGTCGGAAACGGTGGTGCATCCGCGCACG
CGCAACACCTTGGCCTTCGTCCCGGCTCAGTTCAACGAGCTGGAGGTGATGCCCAAGGAACGCGAGCTGATCGAGATCTG
CAAGCAGGAGAAAGCAGAAGGTCGCAAGACCCTGGTCTATTCGGTCTACACCGGCACGCGCGATACCACGTCGCGTTTGA
AGGTGCTGCTGGAGCAGGAAGGCTTCAAGGTGGCGGTACTGCGCGCGAGCGTGGATGCCTCCCGCCGCGAAGACTGGATC
GCCGAGCAGTTGGACCGTGGCATCGACGTGCTCATCACCAATCCCGAGCTGGTGAAAACCGGCCTGGACCTGCTGGAGTT
CCCGACCATCGTGTTCCTCCAGTCCGGCTACAACGTGTATTCGCTGCAGCAGGCCGCCCGGCGCTCATGGCGCATCGGCC
AGAAGCAGCCGGTGCGCGTGATCTACCTGGGCTATGCCAACTCCTCGCAGATGACCTGCCTGGGGTTGATGGCCAGGAAG
ATCATGGTCTCGCAAAGCACGTCGGGAGACGTACCCGAGTCGGGCCTGGATGTTCTGAACCAGGATGGTGATTCCGTCGA
GGTCGCACTGGCCCGGCAGCTTGTCACGGTCTGA

Protein sequence :
MSLDLETVPETAVQGDLLETAASPLTLSLQDFVSEFGDELLDSLNRANPPVYTGQVRVHRQLILAALKRKLFPAQADVVH
AVTELLVDRGERAAIVNGEMGCGKTTVGIATAAVLNAEGYRRTLVLSPPHLVYKWRREIQETVAGAKVWVLNGPDTLVKL
LKLREQLGVPAQGQEFFVLGRVRMRMGFHWKPVFVRRRTPHGDVGACPDCGHVITDLDGEPINPVALEAEESRRKCSHCR
APLWSLIRPRGLSASDQSSTVLKALKRIPTIGEVTAQKLMQKFGDAFLASMLGDNIHEFINLMDGNGELVFSDRQAHRME
RAMANMEFGFGEGGYQPSEFIKRQLPQGTFDLLIADEAHEYKNGGSAQGQAMGVLAAKARKTLLLTGTLMGGYGDDLFHL
LFRALPGRMIEDGYRPTKSGSMTSAAMAFMRDHGVLKDIYSESTGTAHKTAKGTKVSVRTVKAPGFGPKGVLRCVLPFTV
FLKLKDIGGNVLPPYDEEFREVAMDTAQAAAYRDLAGRLTQELKQALAKRDTTLLGVVLNVLLAWPDCCFRSETVVHPRT
RNTLAFVPAQFNELEVMPKERELIEICKQEKAEGRKTLVYSVYTGTRDTTSRLKVLLEQEGFKVAVLRASVDASRREDWI
AEQLDRGIDVLITNPELVKTGLDLLEFPTIVFLQSGYNVYSLQQAARRSWRIGQKQPVRVIYLGYANSSQMTCLGLMARK
IMVSQSTSGDVPESGLDVLNQDGDSVEVALARQLVTV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C71 AAN62165.1 conserved hypothetical plasmid protein Not tested PAGI-2(C) Protein 0.0 92
ORF SG81 AAN62302.1 conserved hypothetical plasmid protein Not tested PAGI-3(SG) Protein 0.0 92
RL063 AAP84188.1 plasmid related protein Not tested PAPI-1 Protein 0.0 71
unnamed ABR13404.1 putative helicase Not tested PAGI-5 Protein 0.0 71
pph67 CAI36108.1 superfamily II DNA/RNA helicase Not tested PPHGI-1 Protein 0.0 70
yea AAW83099.1 Yea Not tested GGI Protein 7e-177 51