Gene Information

Name : xerD (PSTAB_1102)
Accession : YP_004713472.1
Strain : Pseudomonas stutzeri ATCC 17588
Genome accession: NC_015740
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1163308 - 1164204 bp
Length : 897 bp
Strand : +
Note : -

DNA sequence :
ATGCCCACGCTCGACGATCCCGTAATAGACCGTTACCTCGATGCCCTCTGGCTGGAAAAGGGCCTGGCCGATAACAGTCG
GGAGGCCTATCGCAACGACCTCGCCTCATTCAACGGTTGGTTGCAGGAGCGAGGCGTTCGGTTGGCGGCGGCGGGGCGGG
AGATCATTCTCGATCACCTCGCCTGGCGCCTGAACAATGGCTACAAGGCGCGCTCCACGGCGCGCTTTCTTTCCGGGCTG
CGCGGCTTTTACCGCTACCTATTGCGTGAGGGTGAGATTTCGCTCGATCCGACATTGCGTGTCGACTTGCCCCGCCTGGG
GCGGCCGCTACCCAAGGCATTGTCCGAAGCGGACGTGGAGGCCTTGCTGGCGGCGCCCGATACGGGTGATCCGCTTGGGT
TGCGGGATCGGGCAATGCTCGAGGTGCTCTATGCCTGCGGCTTGCGGGTCACCGAGCTGATCAGTCTGACCCTGGAGCAG
GTGAGCATGCGCCAGGGCGTGTTGCGAACCTTCGGCAAGGGCAACAAGGAGCGTCTGGTTCCGCTCGGCGAAGAAGCGCT
GCACTGGCTGCAGCGTTACCAGCGGGATGCTCGAGATCAACTGCTGGCAGGTCGGCCCAGTGACGTGCTTTTTCCGAGCC
AGCGCGGCGAGCAGATGACCCGCCAGACCTTCTGGCACCGTATCAAGCTGCACGCCCGGGTCGCAGGTATCGCGACCGGC
ATTTCGCCCCACACCCTGCGTCACGCGTTCGCAACGCACCTGCTAAACCATGGGGCGGACTTGCGTACCGTGCAAATGCT
GCTTGGCCACAGCGACCTGTCTACGACACAGATCTACACGCACATCGCACGCGCGCGGCTGCAGGAGCTGCATGCGACGC
ATCATCCGCGAGGCTAG

Protein sequence :
MPTLDDPVIDRYLDALWLEKGLADNSREAYRNDLASFNGWLQERGVRLAAAGREIILDHLAWRLNNGYKARSTARFLSGL
RGFYRYLLREGEISLDPTLRVDLPRLGRPLPKALSEADVEALLAAPDTGDPLGLRDRAMLEVLYACGLRVTELISLTLEQ
VSMRQGVLRTFGKGNKERLVPLGEEALHWLQRYQRDARDQLLAGRPSDVLFPSQRGEQMTRQTFWHRIKLHARVAGIATG
ISPHTLRHAFATHLLNHGADLRTVQMLLGHSDLSTTQIYTHIARARLQELHATHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 5e-63 53
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 5e-63 53